Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02544 ATGGCTTCAACCACAGTGTCTCTGTCCAAACGCATGGCTTTCACTTTGTGCTCGAATGTGTTGTTCCTCATGGTGCTTTGTGCTTATGTTATTGTTCATTTCCAATCTTCTGAACATGCTTTTGTGAGGATCAACCACTTTGCCTTCGGTGACAGTGAGGAGCAGGATTGTAAGGATTTCCACAACCTGAGTGACTATAAAGCTAAGTGCTTGTACCTGAAATCCAACAACCCATGTGTCTCTCAGGGCTATATTGACTACCTTTACCTTTTCTATTGCAAAATTGGGGGATTCCCTTTATTGGGTCACAGTCTTTTGTTCCTTTGGCTATTGGTTATGTTCTATCTGTTGGCCAACACAGCTTCTGAATACTTTTGTCCTTCCCTTGAAAACTTGTCCAAATTACTGAGACTCTCCCCCACAATTGCTGGGGTGACTCTTCTCTCTCTTGGCAATGGTGCCAATGATGTTTTTGCCACCCTTGTCTCTTTCAGTGGTAGTGGGACCAGTGGCGTTGGTTTTAACACTGTGCTTGGAGGTGCTTCCTTTGTGTCCTGTGTTGTGGTGGGAATAATGAGCATTTCAATTCGTCATAGGGGGGTTCGGGTGAAAAAATCTGCCTTGGTAAGAGATATCTGTTTTCTTCTCTTGGTTCTTCTATGCTTGTTCACCATCCTGATCGCTGGTGAGATCAATGTTCCTGTGGCAATTGCTTTTCTTTTGATGTATGTGGTGTATGTGATTGTTGTTTATGTCTCATCTACCCGATGGAAGGGTGTATGTGAAGATGCTGAAAGTGATGGCCATTCAAATCAGGGCAATGGTTTAGGTGCCCCTTTGCTTGGTGAGATGGAGAAGGGACTGATTGATTTTGCTGCAAATGGAGCTCAGGAATGTGACTTGAAAATTGAGAAGAAATGTCGCTTTAAGAAATCTTCAACATGTGGAATGTTACTTTATGTCTTGGAGATGCCTCTTTACTTGCCTAGGAGATTGACAATTCCTGTTGTTTGTGAAGATAGATGGTCCAAGTTCTATGCAGTTTCTTCAGCTATGCTAGCACCACTTTTGTTGTCTTCCCTGTGTATTCCAGATAATGAAAACAGTTTCTTCAACTCAAGCCTTATAGTTTGTGGAATTGGATTATTGGTTGGAATTATATTAGGGGTAACTGCATTTTTCACAACCGAGGTGTCAAGCCCTCCAAGAAGATACTTGTTTCCTTGGTTTGCAGGAGGGTTTGTGATGAGTGTGACATGGAGCTATATTTCAGCTCAGGAATTGGTGGGATTGTTGGTTTCACTTGGTTACATATGTGGAGTAAGTCCTTCAATACTGGGGCTAACAGTTCTTGCTTGGGGGAATTCACTTGGGGATTTAGTAACTAATTTGACAATGGCCTTAAATGGTGGACCAGAAGGTGTTCAAATAGCAATATCAGGTTGTTATGCTGGCCCTATCTTCAACACAGTTGTTGGATTAGGCTTATCTCTTGTAAGATCTGCTTGGTCTGAATACCCATCATCTGTTGTGATCCCTAGAGATCCATATCTGTGGGAAACAATGGCACTTTTGGTGATTGGATTGGTTTGGGCACTTGTTGTTTTGATTAGAAGAGATATGAGGCTTGATGCTCTCCTAGGAGGAGGGCTTTTAGTTGTTTACTTCATTTCTCTGTTTCTGAGGCTGATTCAGACACTGGGACCTCTCCAATTTCAGGATATGTTAGTCTTACCCTTCAAAAGATGA 1749 0.4225 MASTTVSLSKRMAFTLCSNVLFLMVLCAYVIVHFQSSEHAFVRINHFAFGDSEEQDCKDFHNLSDYKAKCLYLKSNNPCVSQGYIDYLYLFYCKIGGFPLLGHSLLFLWLLVMFYLLANTASEYFCPSLENLSKLLRLSPTIAGVTLLSLGNGANDVFATLVSFSGSGTSGVGFNTVLGGASFVSCVVVGIMSISIRHRGVRVKKSALVRDICFLLLVLLCLFTILIAGEINVPVAIAFLLMYVVYVIVVYVSSTRWKGVCEDAESDGHSNQGNGLGAPLLGEMEKGLIDFAANGAQECDLKIEKKCRFKKSSTCGMLLYVLEMPLYLPRRLTIPVVCEDRWSKFYAVSSAMLAPLLLSSLCIPDNENSFFNSSLIVCGIGLLVGIILGVTAFFTTEVSSPPRRYLFPWFAGGFVMSVTWSYISAQELVGLLVSLGYICGVSPSILGLTVLAWGNSLGDLVTNLTMALNGGPEGVQIAISGCYAGPIFNTVVGLGLSLVRSAWSEYPSSVVIPRDPYLWETMALLVIGLVWALVVLIRRDMRLDALLGGGLLVVYFISLFLRLIQTLGPLQFQDMLVLPFKR* 583
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02544 582 Gene3D - 347 563 IPR044880 -
Rops8g02544 582 Gene3D - 138 266 IPR044880 -
Rops8g02544 582 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 306 570 - -
Rops8g02544 582 Pfam Sodium/calcium exchanger protein 410 562 IPR004837 GO:0016020|GO:0055085
Rops8g02544 582 Pfam Sodium/calcium exchanger protein 107 251 IPR004837 GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02544 Rops-Chr8 58253808 58256131 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02544 12 568 Antiporters AT5G17850 51.748 2.27e-163 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02544 K13754 - gmx:100787016 804.668