Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02543 ATGGCAGCCTTCATCTCCAAGTCCAAGCTTCAACCAAGAAAACTCACTCTTGTCCTCAATATAATTTTCATCTTCCTCCTTTGTTTTCTTCTAAAAGCCTATATCCACCCATCAAACTCAAATTTTCATGGCCAGTCCAACAATGTCACCCTCACAACCATCTTCAACCATGCAAGGTTGCTCAGTGATGTTAGTGTTAAAGGCTGCAGTGACCTCCACAAGTATTCAGATTATAGCTCTAAATGTTCATATGTCAAAATCCATCATGATTGCAGGTCAAAAGGGTACATAAACTATCTTCACCTCTTTTATTGTAATCTAGGCCAGTCCCCAATTCTAGGACATGTTCTCCTTGCCTTATGGCTTGTGGTGTTGTTCTATCTTTTGGGTGACACAGCTTCCAATTACTTTTGCAACTCCTTAGAAGGCTTGTCCAATGTCTTGAGGCTCTCTCCAACCATTGCTGGAGTAACCCTGCTTTCTCTTGGAAATGGGGCTCCTGATTTTTTTGCTAGTATTGTTTCTTTCACAAGATCTGACAATGGTGAAGTTGGTCTCAACAGTATTTTGGGAGGGGCTTTTTTTGTGTCTAATGTTGTCTTTGGGATTATAAGCATTCTGGTTAGCTCATATCAAGTTGCAGTTGATAAGGCCAGTTTCATTAGGGATGTTCTTTTCTTCCTTTTCTCTCTTCTCATCCTCCTTATCATTATTTATATTGGTAAAATTACCTTGTTGGGTTCAATCTGCTATGTTTCTATCTACTTCCTTTATGTCTGTGCTGTTTCTGCAACGCATCTCATGTATGGAGGGGATAAGAAAGAAAGGGAAATCATAGTGTCACCGGATGAGTTACTTGAGTCTGGCATACCATTGCTGGGCTATGTTGATGATGAGAAACCAAATTTGGCAGAGCAGAGGGTTGTTCAAGATAAGGAGGAAAGGCCAGAGTGTTTTGGTAAAGATTCGTTTTACTGTTTTTACTTGGGAAAGTTTCTACAAGTAGTAGAATTACCTCTTAGCTTACCAAGAAGGCTTACTATACCAGTGGTGAGTGAAGAGAAGTGGTCAAAACCATATGCGGTTATATCTGTCACATTAGCACCAGTTTTGTTGGCAGGTTTATGTAATGTTCAGAGGGAAAACGTGGGTTCAAGGTACAGTCTAGTTACATACTTGACAGCTGCTTTGATTGGCATAATTTTGGGCAATATGGCATGTGTGACTACCAATAGCTCTAGCCCACCAAAGAAGTCCTTGTTCCCTTGGTTGGCAGGGGGTTTTGCTATGAGCATAACATGGACTTATATTATTGCTCAGGAGCTTGTTTCTCTCTTGGTTTCAATTGGGAATATAATTGGGATTAGTCCTTCAATCCTTGGATTAACTGTCCTAGCTTGGGGTAACTCACTTGGGGATCTGATATCCAATGGTGCCCTGGCTTTGAATGGTGGGACAGATGGTGCCCAAATGGCCATTTCTGGTTGTTATGCTGGTCCTATGTTTAATACTTTGATGGGTTTGGGCTTGCCTCTTGTTCTCTGTGCATGGTCTGAACATCCACACCCTTATGTCATTCCTAAGGATCCTTCCCTCTATGAAGCTCTTCTGTTCTTGATGGGAGGGGTGCTTTGGGCCCTTGTAATATTACCAAAGAAGAATATGATACTAGATAAATCCTTGGGAGCAGGACTCTTGAGTGTATACCTATGCTTTTTGTTTATTAGGATAGCCATTGCTATTGGTGTTCTGGAATTCTAG 1761 0.4117 MAAFISKSKLQPRKLTLVLNIIFIFLLCFLLKAYIHPSNSNFHGQSNNVTLTTIFNHARLLSDVSVKGCSDLHKYSDYSSKCSYVKIHHDCRSKGYINYLHLFYCNLGQSPILGHVLLALWLVVLFYLLGDTASNYFCNSLEGLSNVLRLSPTIAGVTLLSLGNGAPDFFASIVSFTRSDNGEVGLNSILGGAFFVSNVVFGIISILVSSYQVAVDKASFIRDVLFFLFSLLILLIIIYIGKITLLGSICYVSIYFLYVCAVSATHLMYGGDKKEREIIVSPDELLESGIPLLGYVDDEKPNLAEQRVVQDKEERPECFGKDSFYCFYLGKFLQVVELPLSLPRRLTIPVVSEEKWSKPYAVISVTLAPVLLAGLCNVQRENVGSRYSLVTYLTAALIGIILGNMACVTTNSSSPPKKSLFPWLAGGFAMSITWTYIIAQELVSLLVSIGNIIGISPSILGLTVLAWGNSLGDLISNGALALNGGTDGAQMAISGCYAGPMFNTLMGLGLPLVLCAWSEHPHPYVIPKDPSLYEALLFLMGGVLWALVILPKKNMILDKSLGAGLLSVYLCFLFIRIAIAIGVLEF* 587
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02543 586 Pfam Sodium/calcium exchanger protein 424 577 IPR004837 GO:0016020|GO:0055085
Rops8g02543 586 Pfam Sodium/calcium exchanger protein 119 261 IPR004837 GO:0016020|GO:0055085
Rops8g02543 586 Gene3D - 360 578 IPR044880 -
Rops8g02543 586 Gene3D - 150 279 IPR044880 -
Rops8g02543 586 PANTHER NA+/CA2+ K+ INDEPENDENT EXCHANGER 21 585 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02543 Rops-Chr8 58225263 58227273 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02543 72 585 Antiporters AT5G17860 55.019 0.0 532
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02543 K13754 - gmx:100819204 824.313