Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02531 ATGCTTTCAAGTTTCAACCCTTATCACCTGCTTGTTTTGGGGTTTCTGAATGTATGGTTGAAAAAAATTTGGATTTTGTTCAATTGGGTGGCCTGTGCAACTTCTGAAGGGCTTCTGTTTCTAATGGAAAATAAAAGCGACCCCTCTGTGTTGCTGGTGTTGGTTACCCTTTTACTTTCTATCTATCATTCTGAGCAACTACAATCCTCCCACTCTCAGACCCTTCTAAGAATTCAACAGCTATTGAACTTTCCTGCTGCCTTAAGCAAGTGGAATAACAACACAGACTTTTGCGGCACAGATTCAAACTCTTCTCTCACTGTAGTATGCTATGAAGACACCATAACCCAACTGCACATAATAGGTGAAAGAAGAACACCTCTCCCTAAAAATTTCTCAATAGATTCCTTTGTTACAACACTGGTAAGGCTTCCCAGTTTGAAAGTCCTCACACTGGTTTCTCTTGGTATATGGGGTCCATTGCCTAGTAAGTTTGCTCGTTTGTCATCATTGGAAATAGTTAACATGAGTTCAAATTATCTCTATGGTTCCATCCCTCCAGAACTTTCATCCTTGTCAAATCTTCAAACACTCATTCTTGACAACAACATGTTAGAAGGCGAGCTTCCTAATTGGCTTGATTTAATTCCAGCCTTAACTGTGTTAACTTTGAAAAACAATTTGTTCAATGGAACTCTTCCAAATTCACTTGGTAGCTTGGAGAATTTGAGAGTTCTTTCACTTTCCCATAATCACTTTTATGGTGTAGTACCTGATTTGAGCCGTTTGACAAGTCTTCAAGTGCTTGAATTAGATGACAATGCCTTTGGACCTCAGTTTCCTAAGCTTGGTCACAAGTTGGTTACTCTAGTGCTGAGAAATAATAGGTTCAGATCTGGCATCCCTGCTGAATTGAGCTCATATTTTCAGCTTGAGAGATTGGATATCTCATCAAATACATTTGTAGGGCCATTCCAGCCTGCATTGTTATCACTTCCTTCTATTACCTACCTCAACATTTCTGGGAACAAATTAACTGGGATGCTTTTTGAGTATCAGTCTTGCAATTCTGAGCTTGAAGTGGTGGATTTATCCTCAAATCTTTTGACCGGAAACTTACCTAGATGTTTACTGTCAAATTCAAGTGATAGGACTGTCCTTTATGCTAGCAATTGTCTAGAGGAAACGAATCAAAATCAGCATCCACAGCCGTTTTGCCACACTGAAGCCTTAGCTGTGGGAATATTACCTGACAGAAAGAAGCACAAACATGTATCTAAGGTAGTTCTTTCCCTTGGCATAGTAGGTGGGACTCTTGGAGGAGTAGCACTTCTTTTGCTTATTTTCTTTATTGTTAGAAGAGGAAATGCCAGAAGCAAAATGAAGAATCCTCCAACAAGAGTAATATCAGAGAATGCAGCTTCTGGATACACCTCTAAGTTGCTTTCTGATGCAAGGTATATATCTCAAACAAAGAAGTTGGGAGCAGTTGGCCTGCCAACTTATCGAAGTTTCTCATTAGAAGAGATTGAGGCAGCTACAAACTACTTTGACACAGCTTCTTTAATGAGTGAAGATTCTTATGGGCAGATGTGCAGAGGTCAGCTGAAGAATGGCTCGCTTGTTGCTATTAGATGTATACAAATGAAAAAAGGATACAGCACTCAGAACTTCATGCACCACATAGAGCTGATATCAAAACTTAGGCATCGTCATTTAGTCAGCGCTATTGGACACTGCTTTGAATGTTCTCTAGATGATTCAAGTGTCAGCAGAATATTTCTTGTCTTCGAATACGTACCAAATGGCACACTCAGGAGCTGGACCTCTGAAGGGCATGCTAGAAAATCCCTGAGCTGGACTCAACGCATAGGAGCTGCAATTGGCGTGGCAAAGGGAATCCAATTTTTGCATACAGGGATTGTCCCTGGTGTATATTCCAACAATCTCAAAATAGAAGATGTTTTATTGGATCAGAATCTTGTTGCAAAAATCTGCAGTTATAACCTGCCTTTGTTATCTAACATTGGAAAGGTTCGGCATGGAAATTCTTCCAATGGATCCAAAAATTCTAGCATTAATAAAAGTGGTAAGCATGAAGATAAATCTGATATACATGACTTTGGAGTGATACTACTGGAGCTCATTCTAGGAAGGGCAATAAAGACAATGCATGATGCGGATGCTTTTAAGGATCTGTTGCAAGCCAGCATAGGAGCTGACAATGAGGCTCGGAGGAGCATTATTGATCCTTCAATTCGCATGGCATGCTTGGATCAATCATTGAAGACAATGGTGGAGATTTGTGTGAGGTGCTTGGCTAAAGAGCCAGAAGATAGGCCCTCTATAGAGGATGTGTTGTGGAATTTGCAGTTTGCTTCTCAAGTACAGGATGCATGGAGAGGGGATTCTCAAAGTAGTGAGGGGTCACCAGGCTCACCTCTAGAGTCTCGAAGACAAGCCTTCCATTAG 2472 0.4066 MLSSFNPYHLLVLGFLNVWLKKIWILFNWVACATSEGLLFLMENKSDPSVLLVLVTLLLSIYHSEQLQSSHSQTLLRIQQLLNFPAALSKWNNNTDFCGTDSNSSLTVVCYEDTITQLHIIGERRTPLPKNFSIDSFVTTLVRLPSLKVLTLVSLGIWGPLPSKFARLSSLEIVNMSSNYLYGSIPPELSSLSNLQTLILDNNMLEGELPNWLDLIPALTVLTLKNNLFNGTLPNSLGSLENLRVLSLSHNHFYGVVPDLSRLTSLQVLELDDNAFGPQFPKLGHKLVTLVLRNNRFRSGIPAELSSYFQLERLDISSNTFVGPFQPALLSLPSITYLNISGNKLTGMLFEYQSCNSELEVVDLSSNLLTGNLPRCLLSNSSDRTVLYASNCLEETNQNQHPQPFCHTEALAVGILPDRKKHKHVSKVVLSLGIVGGTLGGVALLLLIFFIVRRGNARSKMKNPPTRVISENAASGYTSKLLSDARYISQTKKLGAVGLPTYRSFSLEEIEAATNYFDTASLMSEDSYGQMCRGQLKNGSLVAIRCIQMKKGYSTQNFMHHIELISKLRHRHLVSAIGHCFECSLDDSSVSRIFLVFEYVPNGTLRSWTSEGHARKSLSWTQRIGAAIGVAKGIQFLHTGIVPGVYSNNLKIEDVLLDQNLVAKICSYNLPLLSNIGKVRHGNSSNGSKNSSINKSGKHEDKSDIHDFGVILLELILGRAIKTMHDADAFKDLLQASIGADNEARRSIIDPSIRMACLDQSLKTMVEICVRCLAKEPEDRPSIEDVLWNLQFASQVQDAWRGDSQSSEGSPGSPLESRRQAFH* 824
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02531 823 Gene3D Phosphorylase Kinase; domain 1 488 599 - -
Rops8g02531 823 MobiDBLite consensus disorder prediction 799 814 - -
Rops8g02531 823 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 68 284 - -
Rops8g02531 823 PANTHER UNNAMED PRODUCT 135 719 - -
Rops8g02531 823 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase isoform A 285 402 - -
Rops8g02531 823 SUPERFAMILY Protein kinase-like (PK-like) 499 794 IPR011009 -
Rops8g02531 823 Gene3D Ribonuclease Inhibitor 68 286 IPR032675 -
Rops8g02531 823 MobiDBLite consensus disorder prediction 682 701 - -
Rops8g02531 823 MobiDBLite consensus disorder prediction 799 823 - -
Rops8g02531 823 SUPERFAMILY L domain-like 74 393 - -
Rops8g02531 823 ProSiteProfiles Leucine-rich repeat profile. 242 264 IPR001611 GO:0005515
Rops8g02531 823 Gene3D Transferase(Phosphotransferase) domain 1 600 807 - -
Rops8g02531 823 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 600 806 - -
Rops8g02531 823 ProSiteProfiles Protein kinase domain profile. 517 792 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02531 823 FunFam Putative inactive leucine-rich repeat receptor-like protein kinase 490 599 - -
Rops8g02531 823 Pfam Protein tyrosine and serine/threonine kinase 524 787 IPR001245 GO:0004672|GO:0006468
Rops8g02531 823 Gene3D Ribonuclease Inhibitor 287 408 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02531 Rops-Chr8 57957385 57963507 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02531 84 817 Miscellaneous Gene Families AT3G03770 62.703 0.0 882
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Rops8g02531 PK_Tyr_Ser-Thr 1.7e-21 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02531 - - gmx:100807539 1255.74