Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02506 ATGGCCAAGATCCTCTGTTCATACACAGTGACCCCCTCTGAGGTCACATCATCAACAAGACTCACTCTTTCCAACTGCGATCAAATCAAGCTCCCCAACCATGGATCTCAACTTTATCTCTACACTAACACAAACATCACTGATGATTCATCACTCAACACTTGGATCCACACTCTCAGAACCTCTCTCAGTAAAGCTTTGACTCTCTACTATCCCTTTGCTGGTAGATTGAGCTGGATCCAAGGTGGCCGTTTGGAACTCCTTTGCAACGCCAAAGGGGCACTCCTCTTTGAAGCCACGTGTGAGGTCCCTTTGGATGATTTGGGTGATTTTGGTGCCACCCATTTTGTGGAACAACTTGTGCCAAAGATTGAATATGATGTCCCTATTGAGGAAGTTCCTTTGCTTGTGGTACAGCTAACTATATTCCCTTGTGGTGCTATCACTTTAGGGGTTGCCCTGTGTCGTGCTGTGGTTGATGGTGCCTCTGCTATGAGTTTCATTAACTCTTGGGCAAAATTAGCCAGGGGAGAGAGCTTAGATTCGAGTATGATGCCACTTCTTGATCGAAATGTGTTAGATTCACGGAGTATGAATATGGCACCACGTTTTCAACACCCTGAGTTTTTCCCACCACCCCTTTGTGAAGCTACCTCCAAGGTGACTAGACCACTGCACGCCACGGCCATCTTTAAACTCACCAAAGACCAAGTTGAGAAAATGAAGGAGACAGCCAACAAGAAGAACAACAAGGTGAGACCTTACACTAGTTTTGAGGTCATAAGTGGTCACTTGTGGAGGTGTGTTTCCAAGGTGCGTTATGCCAACAATGGTGGCCAACCAACAAGGTTAACCACTTTGGTCAATTGCAGAAACCGGATGAACCCACCTCTCCCAAATGCTTATTTTGGGAATGCAACATTTCCCACAGTGACACCAACTTGTTCCTTTGATGACATTGTGCACAACCCTCTTAGCTATGCTGTTGGGAAAGTAAGAGAAGCAATTGAGAGGATCAATGATGAGTATGTAAGGTCTGCTCTTGATTATATAGCAAATCTGAAGGACATGAATTTGTTTAGGGACACATTTTACAACTCTGCAAGAAAAGGTGGACAATTCAGGGGAGACCCAAATTTATATGTGGTTGGTTGGACCAATTTTCCATTCTATGATGCCACAGATTTTGGGTGGGAAAAACCTGTTTATATGGTTCCAGGGAGCATTAATTCTGATGGTAAGGCTTTCATTCTTGACACTGCAAGTGGTGATGGCTTCATTGTGGCCATTTGTTTGCAACCTTCACATATAGATGCTCTGAAGAAGTTGGTTTATGAGGATATAGAACCTACAATTTCCAAATTGTGA 1368 0.4393 MAKILCSYTVTPSEVTSSTRLTLSNCDQIKLPNHGSQLYLYTNTNITDDSSLNTWIHTLRTSLSKALTLYYPFAGRLSWIQGGRLELLCNAKGALLFEATCEVPLDDLGDFGATHFVEQLVPKIEYDVPIEEVPLLVVQLTIFPCGAITLGVALCRAVVDGASAMSFINSWAKLARGESLDSSMMPLLDRNVLDSRSMNMAPRFQHPEFFPPPLCEATSKVTRPLHATAIFKLTKDQVEKMKETANKKNNKVRPYTSFEVISGHLWRCVSKVRYANNGGQPTRLTTLVNCRNRMNPPLPNAYFGNATFPTVTPTCSFDDIVHNPLSYAVGKVREAIERINDEYVRSALDYIANLKDMNLFRDTFYNSARKGGQFRGDPNLYVVGWTNFPFYDATDFGWEKPVYMVPGSINSDGKAFILDTASGDGFIVAICLQPSHIDALKKLVYEDIEPTISKL* 456
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02506 455 Gene3D - 2 211 IPR023213 -
Rops8g02506 455 Gene3D - 217 447 IPR023213 -
Rops8g02506 455 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 10 433 - -
Rops8g02506 455 Pfam Transferase family 6 443 - -
Rops8g02506 455 Coils Coil 231 251 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02506 Rops-Chr8 57513588 57515790 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02506 4 446 Monolignol Biosynthesis Gene Families AT5G48930 36.465 9.86e-90 278
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02506 K13065 - gmx:100819383 583.563