Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02505 ATGGTCAGCGTCGAATCTTATTGCACCATCTTCCCCTCTGAACCCACCCCCAATGGAAAAATCTATTCCTTGTGCGAACAAATCAAGCTTCGCACTCACGCTCCTCTCCTTTATGTCTATAAGCCACATCACCATAACAATGAATCAACCTTAGTTCAGACCCTTAAAACCTCTCTTAGCAAAGTTTTAGTTATTTACTATCCACTTGCTGGGAGATTGGGTTGGATTGAAGGAGGGAAATGGGAACTCAATTGCAACGCCAAAGGAGCGTTGCTATTGGAAGCAAAATGCAAAGAAGTGAATTTGTGTGATTTTGTGCCAACCAATTTGGTTTCACAACTTATACCCAACATTGATTATGATGTTCCCATTGAAGACATGCCTCTGTTGTCGGTGCAACTAACAAGGTTCCCTTGTGGCAGTTTTACCATCGGCGTTGCCTTTTGTCGCGCCTCAATTGACGGAACAGCATCCATGCGTTTCATGAACACATGGGCGAAGCTAGCACGTGGGGAGCCTTTGGACCCAACAGAAATGCCACGTCATGATCGAACATTGCTAGATTCACGCAAGTTGCATTCATCTTTGTACCATCATTCTGAGTTTCAGGAGCCTCCTGTTTGGGTAGGTGGATTGGGAGACGTTGGGGAAGTGGTTGTTGCCCTTGTGAAACTCACGGGTGAACAAGTCCTGAAGCTCAAGAATAAGGCAAGTACTAGTACTAGTGTTAAGACAAGACCTTATTCAACTTTTGAGGTTGTTGCAGGGTACCTTTGGAGGTGTGTCAGCAAAGCACGCTATGCTGGAAATGTTGACCAACCTACGAGGTTGTCGACTTTGGTTAATTGTAGAAACCGGTTAACGCCACCTCTTCCAAGTGATTATGCTGGGAATGCTGCATTTCCAACCGTGACACCAACTTGTTCCTTTGATGACATTATGCATAAGCCTTTGAGTTATGCAGTTGGGAATGTTAGGAAAGCACTTGAAAGGGTGACTGGAGAGTTTGTTGGGTCAGCACTTAATTACATAGAAAGCGAGAAGGATATGAACTTGGTGAGGTATAATTTTCACTACCCTGCACCGAGTGTGCATAAGGGACCTTCCAAGGGGAACCCAAACCTTTTTGTTGTGAGTTGGATGAATTTCTCTTTCAAAGATGCGGATTTTGGGTGGGGGAAACCTGTTTATTTTGGGCCAGGATACATGGATTCTGAAGGGAAGGCCTTCCTTCTGAATAATGCTAATGGAGATGGCATTGTTGTGGCTATTTCTTTGCACACGTCTCACATGGATACTTTCAGGAAAGTGTTTTATGATGATATAGAAGAGGTGTTTCCCTCTTCCAAATTGTGA 1356 0.4417 MVSVESYCTIFPSEPTPNGKIYSLCEQIKLRTHAPLLYVYKPHHHNNESTLVQTLKTSLSKVLVIYYPLAGRLGWIEGGKWELNCNAKGALLLEAKCKEVNLCDFVPTNLVSQLIPNIDYDVPIEDMPLLSVQLTRFPCGSFTIGVAFCRASIDGTASMRFMNTWAKLARGEPLDPTEMPRHDRTLLDSRKLHSSLYHHSEFQEPPVWVGGLGDVGEVVVALVKLTGEQVLKLKNKASTSTSVKTRPYSTFEVVAGYLWRCVSKARYAGNVDQPTRLSTLVNCRNRLTPPLPSDYAGNAAFPTVTPTCSFDDIMHKPLSYAVGNVRKALERVTGEFVGSALNYIESEKDMNLVRYNFHYPAPSVHKGPSKGNPNLFVVSWMNFSFKDADFGWGKPVYFGPGYMDSEGKAFLLNNANGDGIVVAISLHTSHMDTFRKVFYDDIEEVFPSSKL* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02505 451 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 16 438 - -
Rops8g02505 451 Gene3D - 1 204 IPR023213 -
Rops8g02505 451 Gene3D - 215 441 IPR023213 -
Rops8g02505 451 Pfam Transferase family 2 440 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02505 Rops-Chr8 57497121 57498638 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02505 2 440 Monolignol Biosynthesis Gene Families AT5G48930 36.384 9.47e-85 265
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02505 K13065 - gmx:100775549 643.654