Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02504 ATGAATTCCTCTTCCTATTCCGTTGTCACAAACCCCAACGGCACGGTGCAGGTCTGTTTCAACAAGACAATATCCCACGGTTCTGCCCTTTGGGTAGAAAATTCTTTAGAAACAACACTACCTGCCTTTGTTCTGCAATTCGCTATTATCCTAGCACTCAATCGCTTTTTCCTCCTTCTCGCTGAATCATTCCATGTACCTCGAATTGTTGCCAATATTTTTACTGGTTTTTTATTTGGTCCATCTGCTCTGGGGCGCTGGAATTATTTTTTCAAAAACATATTACCTTATAGTAACATGTTGCCATTTGAGACCATGGGAGCGGTGACTCTTGTTTACTACGTGTTCTTGGTTGGCTTAGAGGTAGACTTGAAACCAATAACAAGGTGTTACAATAAGAAGGCCATGGTTATTGCCATTGTTGCCACAGTCTTCACTTTCCCAGTTGGGGTTGGCTTGTACTACCTTCTTGTTACCGACATGGGGCGCAAAGCTTTTGATCATGTTAGACACATAAATGGTGCAATATTATGGGGAATCACCCTTTCTTGCAGCACTGAGTTCCCTGAGATTGCTAAAATCCTTTCAGATTTAAAGCTTCTGCTCACAGAGAATGGACAATTGGCTTTAGCCTCTTCTTTGGTTAATGACTTGTTCTCTGGGACCCTCTTTCTGTTGGCTCTAACTCATTTCTATTACTCTTCTGTATTATTATTGTTCCTTATCCTAGTGATTGTCTTGGTCTTCTTTTTTGCACTTCCTCCTATTGTTAAGAGGCTCATCAACAAAATTGGAACTGGGGATCGTGAGTTCCTTGAGTCACAAGTAGTGTTTCTGCTGCATATAGTTTTGGTGATTGGACTCTTCTCAGATGGATTGGGTTCAAATGCTAGCACAGGGGCTTTCTTTTTAGGAGTTATAATCCCAAAGGGTGCGTTTAATAATGCAGTTCGGGACAAGGTGTTTGATTTTGTGTCTGTGTTTATGATGCCACTCTTCTTTGTTGGTATTGGGGCGAGAATCAAGATCCAAGAATTGGTATTGGACACTCATTGGACAACAGTGGTGATTGTTATTGTGTTGGCCTTCATGGCAAAGATAGTGTGCACCTTCGCTGTCTCTTGGATCTACCAGATGCCACTCAAGGAAGGATTGTCCCTTGCACTGCTTGTGAACACTAAAGGAACAATGCCATTACTCGTTCTATACTGCGGCAGGGACAGGCTTGATCTGGACCACCAAACCTATGGGGCGATGCTGTTGGCGTGCTGGTTAATGACGGGTATTATGGGGCCCGTCTTGGCTTATGTCACAAAAACCGTTAGCACGAGGAAGTTTGTGGGCAGCCAACGGAAGACCATGCAAGGCACACGCCCAGATTCACCGCTAAGAGTGTTGGCCTGCGTCCACACTAAGCGCGACTCACACGCCATCCTCAACCTTTTGAAAGCCTCCTCTCCATCAGTCAGGTGCCCAATCCAGGTGTTGGCAATGGAGCTGATCAAGATGGCAAATCGCCCCGCTTCATCGTTCATCATAAGGGAAGCTAGAAAACCATCGTTCTGCTCCAAATCGAGCAAGGTAGAGAGCTTCAAGAAAGACAACGGTGGAGGAGGTGACAACCTAAAAAGCTTCGACAACCTCAGCCAAGCAATCTTTGCCGAGAAACTAAGGGTTGTCTCCGACTACAACACCATGCACAAAGACATTTTGAACCTAACAAGACGCAGACGCGGGACCCTAATCTTAACCACACTCTACAAGCAACCAACCTACGATGGTTTAGGAGCAGGTGCCGCCACAGCCAGAGCCGTCAACATCATCAACAGGGACAACGCAAGCAAGGATGAGAAGAAAATTGTGTTGGAAAATCTAGTAAAGGAAGCACCATGTTGTTTAGCCATATTGGTAGACAGAGGTTTTGGTGAGAAACGTGCAAAGGAGAAAAGAATAGCCATGTTCTATGTTGGTGGTGAAGATGACCGTGAAGCTCTTTCTTATGCGTGGAGAATGAGTAGGAACATGGAGGTTCGGTTAACTGTGGTGAGGCTCATTTGGGACAACCCTGAAGATGGGTTTGATGAAAATGACAGGGAGTATCTTAGGGAGTTCGTGCAACAAGCCATGGACACGCCACGTGTGAGATATTTGGAGAAGATGGTGAAGGATGAGAAGGAAACGGTGACGCTTTTGAATAAGATTGGGAACAAAGGGTTTGATTTGTATATAGTTGGGAGAGGACATGGGAGGAAGATGTCGTTGGCACAAACGGTGGAGCCTGTGTTGGAGGAACCTGCTTTGGGTCCTCTTGGGGATACTTTATCGGATTTGAACTCTGCTGCAGAGACATCCATTTTGATATTTCAAAGACATGCTGTTGTAAAAGATGGTGATGATGATGATTCGGGGAAACATGTTCGCTCTGCGTCTGCGCAATTTGTTGATAGCCTGATTGAGCAGCAATTGATGATTCCTCAACCAGCATATCCAGCTATGATTTTTAGTCACTATGCTTAA 2517 0.4489 MNSSSYSVVTNPNGTVQVCFNKTISHGSALWVENSLETTLPAFVLQFAIILALNRFFLLLAESFHVPRIVANIFTGFLFGPSALGRWNYFFKNILPYSNMLPFETMGAVTLVYYVFLVGLEVDLKPITRCYNKKAMVIAIVATVFTFPVGVGLYYLLVTDMGRKAFDHVRHINGAILWGITLSCSTEFPEIAKILSDLKLLLTENGQLALASSLVNDLFSGTLFLLALTHFYYSSVLLLFLILVIVLVFFFALPPIVKRLINKIGTGDREFLESQVVFLLHIVLVIGLFSDGLGSNASTGAFFLGVIIPKGAFNNAVRDKVFDFVSVFMMPLFFVGIGARIKIQELVLDTHWTTVVIVIVLAFMAKIVCTFAVSWIYQMPLKEGLSLALLVNTKGTMPLLVLYCGRDRLDLDHQTYGAMLLACWLMTGIMGPVLAYVTKTVSTRKFVGSQRKTMQGTRPDSPLRVLACVHTKRDSHAILNLLKASSPSVRCPIQVLAMELIKMANRPASSFIIREARKPSFCSKSSKVESFKKDNGGGGDNLKSFDNLSQAIFAEKLRVVSDYNTMHKDILNLTRRRRGTLILTTLYKQPTYDGLGAGAATARAVNIINRDNASKDEKKIVLENLVKEAPCCLAILVDRGFGEKRAKEKRIAMFYVGGEDDREALSYAWRMSRNMEVRLTVVRLIWDNPEDGFDENDREYLREFVQQAMDTPRVRYLEKMVKDEKETVTLLNKIGNKGFDLYIVGRGHGRKMSLAQTVEPVLEEPALGPLGDTLSDLNSAAETSILIFQRHAVVKDGDDDDSGKHVRSASAQFVDSLIEQQLMIPQPAYPAMIFSHYA* 839
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02504 838 Gene3D - 610 767 - -
Rops8g02504 838 PANTHER CATION/H + ANTIPORTER 20 791 - -
Rops8g02504 838 Gene3D - 41 446 IPR038770 -
Rops8g02504 838 Pfam Sodium/hydrogen exchanger family 49 437 IPR006153 GO:0006812|GO:0015297|GO:0016020|GO:0055085|GO:1902600
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02504 Rops-Chr8 57479860 57484689 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02504 18 800 Antiporter Super Family AT2G13620 32.195 2.43e-131 410
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02504 K26731 - psat:127126630 1149.81