Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02497 ATGCCTGCTCAAAAAGCTCTAAGCCTTGTGCTGGAAAACTCAAGCCTTGAGCTCCTAAGCCCTTCCTCTTCGGTGAGTGCCCTCAATAAGCTTACGATTCAAGCTCCAAATATGGAGCCTTGCACTTCGAATAACTGCTGCCAAAGTGGGAACCCAAAGACCCCAACCTCTCAAGAAAGACGTGAAACTGGCAAAAAGAAGGAGAGTGGGAAATCATCTGTTCTGTTGGATGTGAAGCCATGGGATGATGAGACTGATATGAAAAAGCTTGAAGAAACAGTGAGATCTGTTCAGATGGAAGGGTTGCTCTGGGGTGCATCCAAACTTGTTCCTGTTGGGTACGGCATCAAGAAAATGACAATTATGCTTACTATTGTGGATGACCTAGTCTCTGTCGACACTCTTATTGAGGAACATCTTACAGTTGAGCCCATCAATGAATATGTCCAGAGTTGTGACATTGCGGCCTTCAACAAAATATAA 483 0.4451 MPAQKALSLVLENSSLELLSPSSSVSALNKLTIQAPNMEPCTSNNCCQSGNPKTPTSQERRETGKKKESGKSSVLLDVKPWDDETDMKKLEETVRSVQMEGLLWGASKLVPVGYGIKKMTIMLTIVDDLVSVDTLIEEHLTVEPINEYVQSCDIAAFNKI* 161
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02497 160 PANTHER EF-HAND AND COILED-COIL DOMAIN-CONTAINING FAMILY MEMBER 60 160 - -
Rops8g02497 160 FunFam Elongation factor 1-beta 1 like 65 160 - -
Rops8g02497 160 ProSitePatterns Elongation factor 1 beta/beta'/delta chain signature 2. 149 160 IPR001326 GO:0003746|GO:0005853|GO:0006414
Rops8g02497 160 Pfam EF-1 guanine nucleotide exchange domain 73 160 IPR014038 GO:0003746|GO:0006414
Rops8g02497 160 CDD EF1B 69 160 IPR014038 GO:0003746|GO:0006414
Rops8g02497 160 Gene3D - 64 160 IPR014717 -
Rops8g02497 160 MobiDBLite consensus disorder prediction 39 57 - -
Rops8g02497 160 SUPERFAMILY eEF-1beta-like 68 160 IPR036219 -
Rops8g02497 160 MobiDBLite consensus disorder prediction 58 72 - -
Rops8g02497 160 SMART EF1_GNE_2 71 160 IPR014038 GO:0003746|GO:0006414
Rops8g02497 160 MobiDBLite consensus disorder prediction 39 72 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02497 Rops-Chr8 57348730 57359409 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02497 61 160 Eukaryotic Initiation Factors Gene Family AT2G18110 84.000 4.66e-59 181
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02497 K03232 - qsu:112012665 191.43