Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02462 ATGGTTTTGCTCTGGCCTCAGACTAAGAGCATGGACTTCCTAACCCTTCTCAGTTTTCTACTCTTCTTAATGCCTGCAATCTCTTCCTCCCAGTATCTTGGGAAAAACCTACTCACTCATCGTAAGATATTCCCTAAACAAGAAGCCATTACATCTTACGCTGTCATCTTTGATGCTGGCAGCACCGGCAGCCGTGTGCATGTCTACCATTTTGATCAGAACTTAGATCTCCTTCACATTGGTGAAGATCTTGAGTTTTATGATAAGGTCACGCCGGGTTTGAGTTCATATGCAGATGATCCTGATCAAGCAGCAGAATCTCTGATTCCACTTTTAGAGGAAGCAGAAAATGTGGTCCCTGAGGACATGCTCTCCAAGACACCCGTTAGGCTTGGGGCAACTGCAGGTTTAAGGCTTTTGGATGGGGATGCTTCTGAAAAGATATTGCAAGCGGTTAGGGATATGCTCAGCAACAGAAGCACCCTGAACGTTCAATCTGATGCAGTATCTATTATTGATGGAACCCAAGAAGGTTCTTATCTGTGGGTGACAATTAACTATCTACTGGGAAAATTGGGAAAAAAGTTTTCGAAGACGGTAGGAGTAGTTGATCTTGGAGGTGGATCGGTTCAAATGGCATATGCTGTGTCAAGAAACACAGCCAAAAATGCTCCAAAAGTACCAGATGGAGAGGATCCGTACATAAAGAAGCTTGTACTCAAGGGAAAGAAATATGACCTCTACGTTCACAGTTACTTGCGCTTTGGCAAAGAAGCATCTCGTGCCGAGATTTTGAAGGTCACAAATGGTGCTGCTAACCCTTGCATTTTAGCTGGCTTTAATGGGATCTACACATATTCAGGAGTGGAGTATGAGGCCTTTGCTCCTACCTCTGGCTCCAACTTCGATGAATGTAGAGAGATAGTTCTTGAGGCTCTCAAAGTGAATGAGTCATGTCCCCATCTGAATTGCACTTTTGGTGGAATATGGAACGGTGGAGGAGGAAGTGGACAGAAAAATCTTTTTGTCACTTCATCATTCTATTATGTGCCTGCAGACGTTGGTATTGTTGATCCGAATAAACCCAATTCCGAAATTCAAATAGTGGATTTGAAGACTGAAGCTAAGAGAGCTTGTCAAATAAAATATGAGGATGCTAACTCCACTTATCCACTTCTTGATGTGTCGAGTCTTCCATATGCATGCATGGATCTTATATATCAGTACACATTGTTCACTGATGGATTTGGCCTAGATCCATGGCAAAATATTACAGTGACAAAGGAAATTGAATATCAGGATGCTGTTGTGGATGCAGCATGGCCTCTAGGCAGTGCAATAGAAGCCATATCATCATTAGCTAAATTTAAACGATTAATGTATTTTATTTGA 1392 0.4224 MVLLWPQTKSMDFLTLLSFLLFLMPAISSSQYLGKNLLTHRKIFPKQEAITSYAVIFDAGSTGSRVHVYHFDQNLDLLHIGEDLEFYDKVTPGLSSYADDPDQAAESLIPLLEEAENVVPEDMLSKTPVRLGATAGLRLLDGDASEKILQAVRDMLSNRSTLNVQSDAVSIIDGTQEGSYLWVTINYLLGKLGKKFSKTVGVVDLGGGSVQMAYAVSRNTAKNAPKVPDGEDPYIKKLVLKGKKYDLYVHSYLRFGKEASRAEILKVTNGAANPCILAGFNGIYTYSGVEYEAFAPTSGSNFDECREIVLEALKVNESCPHLNCTFGGIWNGGGGSGQKNLFVTSSFYYVPADVGIVDPNKPNSEIQIVDLKTEAKRACQIKYEDANSTYPLLDVSSLPYACMDLIYQYTLFTDGFGLDPWQNITVTKEIEYQDAVVDAAWPLGSAIEAISSLAKFKRLMYFI* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02462 463 CDD NBD_sugar-kinase_HSP70_actin 55 214 - -
Rops8g02462 463 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 172 187 IPR000407 GO:0016787
Rops8g02462 463 FunFam Apyrase 1 173 431 - -
Rops8g02462 463 Pfam GDA1/CD39 (nucleoside phosphatase) family 51 454 IPR000407 GO:0016787
Rops8g02462 463 Gene3D Exopolyphosphatase. Domain 2 173 431 - -
Rops8g02462 463 Gene3D - 53 447 - -
Rops8g02462 463 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 53 182 - -
Rops8g02462 463 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 16 453 IPR000407 GO:0016787
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02462 Rops-Chr8 56807186 56810961 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02462 24 452 Calmodulin-binding Proteins AT3G04080 54.651 7.51e-163 466
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02462 K14641 - gmx:100781628 732.635