Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02461 ATGGTTCTGCTCTGGCCACATACTAAGAGCATGAACTTCCTAACCCTCGTCACTTTTCTACTCTTCTTAATGCCTGCGATCTCTTACTCCCAGTATCTTGGGAAAAACATCCTCAAACATCGCAAGATATTCCTCAAAGAGGAAAACATTACCTCTTACGCTGTCATCTTTGATGCTGGTAGCACTGGCAGCCGTGTGCATGTCTACCATTTTGATCAGAACTTAGATCTCCTTCCCATTGGTGAAGATCTTGAGTTTTATGATAAGGTCAAGCCCGGTTTGAGTTCATATGCAGATGATCCTGAACAAGCCGCTGAATCTCTGATTCCACTGTTAGAGGAAGCAGAAAGTGTAGTCCCTGAGGACATGCACTCCAAGACTCCCCTTATACTTGGGGCAACTGCAGGTTTAAGGCTTTTGGATGGGAATGCTTCTGAATTGATATTGCAAGCGGTTACGAATATGCTCAACAACAACAGTACCCTGAACGTTCAATCAGTATCTATTCTTGATGGATCAGAAGAAGGTTCTTATCTTTGGGTGACAATTAACTATCTATTGGGAAATTTGGGAAAAGATTTTTCGGAGACAGTGGGAGTTGTTGATCTTGGAGGTGGATCCGTTCAAATGGCATATGCAGTCTCAGAAAATACAGCTGAAAATGCTCCAGAAATATCAGATGGAGAGGATTCATACATAAAGAAGATTTCACTCAAGGGAACAACATATAACCTCTATGTTCACAGTTACTTGTCCTATGGGAAAGAAGCAGCTCGTGCCCAGATTTTGAAGGTCACAAATGGTTCTGTTAACCCTTGCATTTTAGCTGGCTTTAATGGGACCTACACATATTCCAGTGTGGAGTATGAGGCCTTTGGTCCTACTTCTAGCTCCAGCTTCGATGAATGCAGAGAGATAGTTCTTGAGGCTCTCAACGTGAATGAGTCATGTCCATATCAGAATTGCACTTTTGGTGGAATATGGAATGGTGGAGGAGGAAGTGGACAGAAAAATATTTTTGCCACTTCATCTTTCTATTACATCCCCGCAGATGTTGGTATTATTGATTCAAATGCATCCAATGCCGAAATTCTAATAGTGGATCTGAAGACTGAAGCTGAGAGAGCTTGTCAAATAAAATATGAGGATGCTAACTCCACTTATCCACTGTTGGATGAGTCTAGTCTTGCATATGTGTGCATGGATCTTACTTATCAGTATGCCTTGTTGATTGATGGATTTGGCCTAAATCCATCACAAAATATTACAGTGGCAGACGGAATTGAATATCAGGATGGTCTTGTGGATGCAGCATGGCCTCTGGGCACTGCTATAGAAGCCATATCATCATTAGCTACATTTAAACGATTAATGTATTTTATTTGA 1386 0.4141 MVLLWPHTKSMNFLTLVTFLLFLMPAISYSQYLGKNILKHRKIFLKEENITSYAVIFDAGSTGSRVHVYHFDQNLDLLPIGEDLEFYDKVKPGLSSYADDPEQAAESLIPLLEEAESVVPEDMHSKTPLILGATAGLRLLDGNASELILQAVTNMLNNNSTLNVQSVSILDGSEEGSYLWVTINYLLGNLGKDFSETVGVVDLGGGSVQMAYAVSENTAENAPEISDGEDSYIKKISLKGTTYNLYVHSYLSYGKEAARAQILKVTNGSVNPCILAGFNGTYTYSSVEYEAFGPTSSSSFDECREIVLEALNVNESCPYQNCTFGGIWNGGGGSGQKNIFATSSFYYIPADVGIIDSNASNAEILIVDLKTEAERACQIKYEDANSTYPLLDESSLAYVCMDLTYQYALLIDGFGLNPSQNITVADGIEYQDGLVDAAWPLGTAIEAISSLATFKRLMYFI* 462
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02461 461 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 14 451 IPR000407 GO:0016787
Rops8g02461 461 Gene3D - 53 445 - -
Rops8g02461 461 CDD NBD_sugar-kinase_HSP70_actin 55 212 - -
Rops8g02461 461 Pfam GDA1/CD39 (nucleoside phosphatase) family 47 453 IPR000407 GO:0016787
Rops8g02461 461 Gene3D Exopolyphosphatase. Domain 2 171 429 - -
Rops8g02461 461 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 170 185 IPR000407 GO:0016787
Rops8g02461 461 FunFam Apyrase 1 171 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02461 Rops-Chr8 56783407 56789244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02461 24 450 Calmodulin-binding Proteins AT3G04080 52.791 6.55e-152 439