Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02460 ATGGTTTTGCTCTGGCCACAGACTAAGAGCATGGACTTCCTCCTAACCCTCATCACTTTTCTACTCTTCTTAATGCCCGAAATCTCTTACTCCCAGTATCTTGGAAACAACATACTCACTCATCGTAAGTTATTCCCCAAACAGGAAGCCATTACTTCTTACGCTGTCATCTTTGATGCTGGTAGCACTGGAAGTCGTGTGCATGTCTACCATTTTGATCAGAACTTAAATCTCCTTCACATTGGCAAAGGTCTTGAATTTTATAAGAAGATCACACCCGGTTTGAGTGCTTATGCGGATAATCCTGATCAAGCTGCAGAATCTCTGATTCCACTTTTAGAGGAAGCAGAAAATCTGATCCCTGAGGACCAGCACTCCAAGACACCAATTAGGCTTGGGGCAACTGCAGGTTTAAGGCTTTTGGATGGGGATGCTTCTGAAAAAATATTGCAAGCGGTTAGGGATATGTTCAGCAATAGAAGTACCCTGAATGTTCAACCTGATGCAGTATCTATTATTGATGGAACCCAAGAAGGTTCTTATATGTGGGTGACAATTAACTATCTTTTGGGGAACTTGGGAAAAAGGTTTTCAAAGACAGTGGGAGTGGTTGATCTTGGAGGTGGATCAGTTCAAATGACATATGCTGTTTCAAGAAACACAGCTGAAAACGGTCCACAAGTACCAGATGGAGAGGATCCATACATAAAGAAGATTGTGCTCAAGGGAAAGAAATATGACCTCTATGTTCACAGTTACTTACACTATGGCAGAGAAGCATCTCGTGTGGAGACTTTGAAGGTCACTGATGGTTCTTCTAATCCTTGCCTTTTAGCTGGCTTTAATGGTACCTACAAATATTCAGGAGGGGAGTATAAAGCCATTGCTTCTTCTTCTGGCGCCAACTTCAATGAATGCAGAGAGATAATTCTTAAGGCTCTGAAAGTGAATGAGTCATGTCCCCACCAGAATTGCACTTTCGGTGGAATATGGAACGGTGGAGGGGGAAGTGGACAAAAAAAGTTGTTTTTTACTTCATCTTTCTATTACCATCCAGCAGATGTCGGTATTGTTGATCCAAATAAACCCAATTCCGAAATTTATATTGTGGACTTGAAGAATGGAGCTAAGCAAGCTTGTAAAATAAAATTTGAGGATGCTAAATCCACTTATCCACTTCTTACAGAGTCGAGACTTCCATATGTATGCATGGATCTTACATACATGTATACATTGTTAGTTGATGGATTTGGTAGAGCTGTGCAAATGGGTCCAGGCCCGCGGACCGGTCCGCGAACCCGCGGTCCGCGCGGGCTTGGGTCAGGGGCACCAAACAAACATCAAAGAGTCAAAGACCTTGAAAAAAATTTACACAAGAAAGAAGCTCCTCCCTCACTCACGCCGGCCAGACCAACCAGAACAGAACCAGCTCTCTCTCCCTCTCTCTCGGTCTCTCTCCCTCTCTCTCGGCCAGACCAGGACCAGCTCCTCACGCCGGCCAGATCTGCACCAGCTCTCTCTCCCTCTCTCTCGGTCTCTCTCCCTCTCTCTCGGCCAGATCTGCAAATAAACGTTCTCCCTCTCTCTCGAGCCATTTATTTGGGGGAGACTTTCTGCAGCTATATCAGTATTAACAATAGCTCCATTTATTCAATTTCTTCTTTTTTTTTTGTATATACTTAA 1683 0.4379 MVLLWPQTKSMDFLLTLITFLLFLMPEISYSQYLGNNILTHRKLFPKQEAITSYAVIFDAGSTGSRVHVYHFDQNLNLLHIGKGLEFYKKITPGLSAYADNPDQAAESLIPLLEEAENLIPEDQHSKTPIRLGATAGLRLLDGDASEKILQAVRDMFSNRSTLNVQPDAVSIIDGTQEGSYMWVTINYLLGNLGKRFSKTVGVVDLGGGSVQMTYAVSRNTAENGPQVPDGEDPYIKKIVLKGKKYDLYVHSYLHYGREASRVETLKVTDGSSNPCLLAGFNGTYKYSGGEYKAIASSSGANFNECREIILKALKVNESCPHQNCTFGGIWNGGGGSGQKKLFFTSSFYYHPADVGIVDPNKPNSEIYIVDLKNGAKQACKIKFEDAKSTYPLLTESRLPYVCMDLTYMYTLLVDGFGRAVQMGPGPRTGPRTRGPRGLGSGAPNKHQRVKDLEKNLHKKEAPPSLTPARPTRTEPALSPSLSVSLPLSRPDQDQLLTPARSAPALSPSLSVSLPLSRPDLQINVLPLSRAIYLGETFCSYISINNSSIYSISSFFFVYT* 561
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02460 560 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 173 188 IPR000407 GO:0016787
Rops8g02460 560 MobiDBLite consensus disorder prediction 447 461 - -
Rops8g02460 560 CDD NBD_sugar-kinase_HSP70_actin 56 215 - -
Rops8g02460 560 MobiDBLite consensus disorder prediction 423 495 - -
Rops8g02460 560 Gene3D Exopolyphosphatase. Domain 2 174 418 - -
Rops8g02460 560 Pfam GDA1/CD39 (nucleoside phosphatase) family 52 418 IPR000407 GO:0016787
Rops8g02460 560 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 15 418 IPR000407 GO:0016787
Rops8g02460 560 MobiDBLite consensus disorder prediction 472 495 - -
Rops8g02460 560 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 54 184 - -
Rops8g02460 560 FunFam Apyrase 1 174 423 - -
Rops8g02460 560 Gene3D - 54 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02460 Rops-Chr8 56763322 56767810 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02460 53 418 Calmodulin-binding Proteins AT3G04080 56.948 4.91e-143 420
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02460 K14641 - gmx:100781628 625.935