Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02458 ATGGTTTTGCTCTGGTCACACACTAAGAGCAGGGACTTCCTATCCCTTCTCACTTTTCTACTCTTCTTATTGCCTGTGATCTCTTACTCCCAGTATCTTGGGAACAACCTACTCACTCATCGTAAGATATTCCCCAAACAGGAGACCATTACCTCTTACGCTGTCGTTTTTGATGCTGGTAGCACTGGCAGCCGTGTGCATGTCTACCATTTTGATCAGAACTTAGATCTCCTTCACATTGGCACAGGTGTTGAGTTTTCAGATAAGATCACTCCTGGCTTGAGTTCTTACTCGAATAATCCTGAACAAGCTGCAGAATCTCTGATTCCTCTTTTGGAGGAAGCAGAAGATGTGGTCCCTGAAGACCAACACGCCAAGACTCCCGTTAGGCTCGGGGCAACTGCAGGTTTAAGGCTTTTGGATGGGGATGCCTCTGAAAAGATATTGCAAGCGGTTAGGAATATGCTCAACAATAGAAGTACCCTGAACGGTCAACCTGATGCAGTAGCTATTATTGATGGAACCCAAGAAGGTTCTTATCTGTGGGTGACAATCAACTATCTATTAGGGAGGTTGGGAAATAGATTTTCAAAGACAGTGGGAGTGGTTGATCTCGGAGGTGGGTCAGTTCAAATGACATATGCTGTCTCAAGAAACACAGCTAAAAAAGCACCACAAGTACCAGATGGAGATGATCCATACATAAAGAAGCTTGTACTCAAGGGAACGAAATACGACCTTTATGTTCACAGTTACTTGCACTATGGCCAAGAAGCATCTCGTGCAGAGATTTTGAAGGTCACTGATGGTTCTTCTAATCCTTGTCTTTTAGCTGGCTTTGATGGGGTCTACAAATATTCAGGAGAGGAGTATAAGGCCTTTGCCCCCACTTCTGGCTCCAACTTCAATGCGTGCAGAGAGATAGTTCTCGAGGCTCTCAAAGTGAATGAGCCATGTCCCTATCAGAATTGCACTTTTGGTGGGATATGGAACGGTGGAGGGGGAAGTGGACAGAAAAAGCTATTTCTTACTTCATCCTTCTATTACCTACCGGCAGATGTTGGTATTGTTGAGCCAAATAAACCCAATTCCAAAATTAATATCATGGATCTGAAGATTGGAGCTAAGAAAGCTTGTGAAACAAAATTTGAGGATGCCCAATCCACTTATCCACTTCTTGCGGAGTCGAGAATTCCATATGTATGCATGGATCTTACGTACCAATATACGTTGTTAGTTGATGGATTTGGCTTAGATCCATGGCAAGAGGTTACATTAACAAAGAAAATCAAATATCAGGATGCTCTTGTGGATGCAGCATGGCCTCTAGGCAATGCCATAGAAGCTATATCATCGTTGCCTAAATTTGAGCGATTAATGTATTTTATTTAA 1392 0.4296 MVLLWSHTKSRDFLSLLTFLLFLLPVISYSQYLGNNLLTHRKIFPKQETITSYAVVFDAGSTGSRVHVYHFDQNLDLLHIGTGVEFSDKITPGLSSYSNNPEQAAESLIPLLEEAEDVVPEDQHAKTPVRLGATAGLRLLDGDASEKILQAVRNMLNNRSTLNGQPDAVAIIDGTQEGSYLWVTINYLLGRLGNRFSKTVGVVDLGGGSVQMTYAVSRNTAKKAPQVPDGDDPYIKKLVLKGTKYDLYVHSYLHYGQEASRAEILKVTDGSSNPCLLAGFDGVYKYSGEEYKAFAPTSGSNFNACREIVLEALKVNEPCPYQNCTFGGIWNGGGGSGQKKLFLTSSFYYLPADVGIVEPNKPNSKINIMDLKIGAKKACETKFEDAQSTYPLLAESRIPYVCMDLTYQYTLLVDGFGLDPWQEVTLTKKIKYQDALVDAAWPLGNAIEAISSLPKFERLMYFI* 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02458 463 CDD NBD_sugar-kinase_HSP70_actin 55 214 - -
Rops8g02458 463 Gene3D Exopolyphosphatase. Domain 2 173 431 - -
Rops8g02458 463 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 172 187 IPR000407 GO:0016787
Rops8g02458 463 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 16 453 IPR000407 GO:0016787
Rops8g02458 463 FunFam Apyrase 1 173 431 - -
Rops8g02458 463 Pfam GDA1/CD39 (nucleoside phosphatase) family 50 454 IPR000407 GO:0016787
Rops8g02458 463 Gene3D - 53 447 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02458 Rops-Chr8 56636141 56639764 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02458 52 452 Calmodulin-binding Proteins AT3G04080 56.468 7.40e-157 451
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02458 K14641 - gmx:100781628 711.449