Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02456 ATGGACGTCCTAACCCTCATCACTTTTCTACTCTTCTTATTACCTGCGATCTCTTACTCCCAGTATCTTGGGAACAACATACTCACTCACCGTAAGATATTTCCTAAACAAGAAGCCCTTACATCTTACGCTGTCATCTTTGATGCTGGTAGCACTGGAAGTCGTGTGCATGTCTACCATTTTGATCATAACTTAGATCTCCTTCACATTGGCGAAGGTCTTGAGTTTTATGATAAGATCACACCCGGTTTGAGTGCTTATGCGGATGATCCTGAGCAAGCCGCTGAATCTCTCATTCCACTTTTAGAGGAAGCAGAAGATGTGATCCCTGAGGACCAGCACCCCAACACACCCGTTAGGCTTGGGGCAACTGCAGGTTTGAGGCTTTTGGATGGGGATGCTTCTGAAAAGATATTGCAAGAGGTGAGGGATATGCTCAGCAACAGAAGTACGCTGAACGTTCAACCTGATGCAGTAGATATTATTGATGGAACCCAAGAAGGTTCTTATATGTGGGTAACAATTAACTATCTATTAGGGACGTTGGGAAATAGATTTTCAAAGACAGTGGGAGTAGTTGATCTTGGAGGTGGATCAGTTCAAATGGCATATGCAGTCTCAAGAAACACAGCTGAAAATGCTCCAGAAGTACCAGATGGAGATGATCCATACATAAAGAGTATTGTACTCAAGGGAAAGCAATATGACCTCTATGTTCATAGTTACTTACACTATGGCATGGAAGCATCTCGTGCTGAGAATTTGAAGGTCACTGATGGTTCTGCTAATCCTTGCCTTTTAGCTGGCTTTGATGGCCTAGATCCATCGCAAGAGGTTACAGTTGTATTGCAAATCGAATATCAGGATGCTCTTGTGGAAGCAGCATGGCCTCTAGGCAATGCCATAGAAGCTATATCATCATTGCCTAAATTTGAGCGATTAATTCGCAAAGTAACACCACCACGTGTGGACCCTATCCTGTGGAGGGAGAAGGAATCCAACCCCCTCCTGAACAAGAATACATCAAAAGTCATTGGAGGTGCATACACTTTGAAAACTCTTCAAGGTAAACCCATTGCAAGGTTCTGGAATGCCGAGAAGCTAAAGAGATATTACAGTTGA 1122 0.434 MDVLTLITFLLFLLPAISYSQYLGNNILTHRKIFPKQEALTSYAVIFDAGSTGSRVHVYHFDHNLDLLHIGEGLEFYDKITPGLSAYADDPEQAAESLIPLLEEAEDVIPEDQHPNTPVRLGATAGLRLLDGDASEKILQEVRDMLSNRSTLNVQPDAVDIIDGTQEGSYMWVTINYLLGTLGNRFSKTVGVVDLGGGSVQMAYAVSRNTAENAPEVPDGDDPYIKSIVLKGKQYDLYVHSYLHYGMEASRAENLKVTDGSANPCLLAGFDGLDPSQEVTVVLQIEYQDALVEAAWPLGNAIEAISSLPKFERLIRKVTPPRVDPILWREKESNPLLNKNTSKVIGGAYTLKTLQGKPIARFWNAEKLKRYYS* 374
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02456 373 CDD NBD_sugar-kinase_HSP70_actin 45 204 - -
Rops8g02456 373 Pfam GDA1/CD39 (nucleoside phosphatase) family 41 268 IPR000407 GO:0016787
Rops8g02456 373 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 162 177 IPR000407 GO:0016787
Rops8g02456 373 Gene3D - 43 162 - -
Rops8g02456 373 FunFam Ectonucleoside triphosphate diphosphohydrolase 5 43 173 - -
Rops8g02456 373 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 7 271 IPR000407 GO:0016787
Rops8g02456 373 Gene3D Exopolyphosphatase. Domain 2 163 272 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02456 Rops-Chr8 56603651 56612451 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02456 266 307 Calmodulin-binding Proteins AT3G04080 61.905 1.75e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02456 K14641 - gmx:100781628 441.425