Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02454 ATGTTTGGGTTACTAAGAGAGCTGGAGCCGCTACAAGATCCCAAGCAATTGAAGGCTCCGCCCGCCGCCGCCGGTTCCAACGGTCAGATCCGTTACCGATCGCCGTCATCCGCCGAGCTCTTCGACGGCCAGTCAAACAGCAACTCTCCGCCGTCGCACGCCGCCGATCAGCACTCGCCGGAGTTCGAGTCTGGCAAAATGCTGAAGCGTCCTGGCCGTCAGGAGTCCCTCTCCGACAAGATCTACAGGTTCCGAGGGACTCTGCTTGTGATTTCTATCCCGCTCCTTCTCATCACGTTCGTCCTCTACGTTATGCCGTCGAGCTCCTCCAACGAATCCGTCGGTGATTACGCACTCGTTAATCGGAAAATGTCACCGGAGAAAAAATCAAGTAGCTCCTACGCCGTCATCTTCGACGCCGGAAGCTCCGGCAGCCGCGTCCACGTCTTCCATTTCGATCAGAACCTAGATCTCGTTCACATTGGCAAAGATCTCGAACTTTTCGTGCAGATTAAACCAGGTTTGAGTGCTTACGCTCAGAATCCGCAGCAAGCAGCGGAATCTTTGGTTTCGCTTTTAGATAAAGCTGAGAGTGTTGTTCCTCGGGAATTGCGATCCAAGACACCCGTTCGAGTTGGGGCAACTGCGGGTTTGAGGGCTTTGGAAGGAGATGCATCTGATAGGATCTTGCAAGCGGTAAGGGATTTGCTCAAGCAAAGAAGCACATTGAAATCTGAGCCTGATGCGGTTACGGTGCTGGATGGAACACAAGAAGGTGCTTTTCAATGGGTTACAATTAACTATCTATTGGGAAACTTGGGGAAAGATTATTCAAAGACTGTTGGGGTAGTTGATCTTGGAGGTGGATCTGTTCAAATGGCATATGCCATCTCAGAGACTGATGCTGCCATGGCTCCAAAAGTATCAGATGGAGAGGACCCATTTGTCAAGGAGATGTTCCTGAGGGGAAGGAAATATTACCTCTATGTTCACAGCTACTTGCACTATGGTTTACTAGCTGCTCGAGCAGAGATTTTAAAGAATTCTGATGATGCTGAAAACCCTTGTATCCTGTCTGGCTATGATGGATCTTACAAATATGGAGGAAAGCCGTTTAAGGCTTCATCCTCTCCGTCTGGGTCAAGCTTAAATGAATGCAAAAGCGTGGCTCTCAAGGCTCTCAAAGTTAATGAGTCAACATGTACACATATGAAGTGCACTTTTGGTGGGATATGGAATGGTGGAGGCGGGGATGGACAGAAAAACCTTTTTGTTGCCTCATTTTTCTTTGACCGTGCTGCTGAGGCTGGTTTTGCTGATCCAAATGCACCAGTTGCAATAGTTCGTCCTGCAGATTTTGAGGATGCAGCTAAGCAAGCTTGTCAAACCAAACTCGAGAATGCCAAATCCACTTATCCAGATGTTGAAGAGGGAAACCTTCCATACATTTGCATGGATCTTGTATACCAGTATACACTACTTGTTGATGGGTTTGGCATATATCCATGGCAAGAGATCACACTGGTGAAGAAAGTTAAATATGACGATGCCCTCGTTGAGGCAGCATGGCCCCTAGGCAGTGCCATTGAAGCTGTATCATCTACGTAA 1608 0.4838 MFGLLRELEPLQDPKQLKAPPAAAGSNGQIRYRSPSSAELFDGQSNSNSPPSHAADQHSPEFESGKMLKRPGRQESLSDKIYRFRGTLLVISIPLLLITFVLYVMPSSSSNESVGDYALVNRKMSPEKKSSSSYAVIFDAGSSGSRVHVFHFDQNLDLVHIGKDLELFVQIKPGLSAYAQNPQQAAESLVSLLDKAESVVPRELRSKTPVRVGATAGLRALEGDASDRILQAVRDLLKQRSTLKSEPDAVTVLDGTQEGAFQWVTINYLLGNLGKDYSKTVGVVDLGGGSVQMAYAISETDAAMAPKVSDGEDPFVKEMFLRGRKYYLYVHSYLHYGLLAARAEILKNSDDAENPCILSGYDGSYKYGGKPFKASSSPSGSSLNECKSVALKALKVNESTCTHMKCTFGGIWNGGGGDGQKNLFVASFFFDRAAEAGFADPNAPVAIVRPADFEDAAKQACQTKLENAKSTYPDVEEGNLPYICMDLVYQYTLLVDGFGIYPWQEITLVKKVKYDDALVEAAWPLGSAIEAVSST* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02454 535 MobiDBLite consensus disorder prediction 29 55 - -
Rops8g02454 535 Gene3D Exopolyphosphatase. Domain 2 254 513 - -
Rops8g02454 535 FunFam Apyrase 1 254 513 - -
Rops8g02454 535 Pfam GDA1/CD39 (nucleoside phosphatase) family 128 534 IPR000407 GO:0016787
Rops8g02454 535 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 77 534 IPR000407 GO:0016787
Rops8g02454 535 MobiDBLite consensus disorder prediction 1 71 - -
Rops8g02454 535 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 253 268 IPR000407 GO:0016787
Rops8g02454 535 CDD NBD_sugar-kinase_HSP70_actin 136 295 - -
Rops8g02454 535 Gene3D - 134 529 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02454 Rops-Chr8 56576292 56588419 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02454 72 534 Calmodulin-binding Proteins AT3G04080 71.706 0.0 649
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02454 K14641 - gmx:100786073 845.499