Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02449 ATGGGAACCTCTTGTTATGAAGCTCCACCTCTTCTTCAAGACCTGAAGGTGACCATCCACAAAACTTCAATGGTTTTTCCATCCAAGAAAACTGAGAAGAAGTCCTTGTTCTTATCAAACATAGAAAAGGTCCTAAATTTCGACGTGGAAACGGTTCACTTCTTTGCTGCAAACAAAAATTTTCCACCCCATATAGTTGCTGAGAAGTTCAAGAACGCCCTATCAGATGCTCTAGTGGCTTATGACTTCTTAGCTGGAAGATTGAAGGTGAACTCGGAAACCAACAGGTTAGAGTTTGATTGCAACGCAGAGGGTGCTGGGTTTGTGGTGGCTTCTAGCAAATACAAATTGGATCAGATAGGGGACTTGGTTTATCCTAATCCATCCTTTGCACAATTAGTTCACAAGAGTAAGGATTTCCTTAAATCAGGTGATCAACCACTATGTGTTGCCCAGGTAACATCCTTCGAATGTGGCGGCTTTGCAATTGGTTTAACAACCAGCCATACCACTTTTGATGGGCTTAGTGTCAGAACTTTCTTAGACAACATTGCTGCATTGGCTGCTAACAAGCCCCTGGCTGTGATTCCCTGCCATGACAGGCAACTCCTAGCAGCACGATCTCCTCCACGTGTCAGCTTCCCACACCCTGAGATGATCAAGCTAGATAACCTCCCCTCAGGCCTTGAATCTGGTGTCTTTGAAGCCTCCTCAGAAAAACTTGACTTCAAGGTTTTTCGTTTAACCTCTGAAAACATCAACCACCTCAAAGAAAAAGCTAAGGGTAACAGTGTCACACGTGTCACGGGCTTTAACGTTATCACTGCCCTTTTATGGAGATGCAAGGCATTATCAGGGCCATATGATCCTAATAGGGAATCTACTATTCTATATGCTGTGGAAATACGTTCAAGGTTGAACCCTCCATTGCCACAATCTTACTCAGGGAATGCTGTTTTAACAGCATATGCTACTGCAAAGTGTAAGGAATTGGAGAATGGTTCTTTTTCAAGCTTGGTGGAGATGGTGAGAGAGGGTGCAACTAGAATGACTGATGAGTATGCAAGGTCTATTATTGATTGGGGTGAGTTGTATAATGGTTTTCCAAATGGGGAGGTTTTGGTGTCTTCATGGTGGAGATTAGGGTTTGAAGATGTTGAGTATCCATGGGGGAAGCCAAAGTATTGTTGTCCAGTGGTGTATCATAGGAAGGATATTATACTATTGTTTCCTCCTCTCCATGGTGATGGTGATGATGGGGTGAATGTTATAGTGGCTCTTCCTCCCAAGGAAATGGAAAAATTCCAGAGTCTCTTTTACAGGTTCATGATTGGAGATTGA 1341 0.4318 MGTSCYEAPPLLQDLKVTIHKTSMVFPSKKTEKKSLFLSNIEKVLNFDVETVHFFAANKNFPPHIVAEKFKNALSDALVAYDFLAGRLKVNSETNRLEFDCNAEGAGFVVASSKYKLDQIGDLVYPNPSFAQLVHKSKDFLKSGDQPLCVAQVTSFECGGFAIGLTTSHTTFDGLSVRTFLDNIAALAANKPLAVIPCHDRQLLAARSPPRVSFPHPEMIKLDNLPSGLESGVFEASSEKLDFKVFRLTSENINHLKEKAKGNSVTRVTGFNVITALLWRCKALSGPYDPNRESTILYAVEIRSRLNPPLPQSYSGNAVLTAYATAKCKELENGSFSSLVEMVREGATRMTDEYARSIIDWGELYNGFPNGEVLVSSWWRLGFEDVEYPWGKPKYCCPVVYHRKDIILLFPPLHGDGDDGVNVIVALPPKEMEKFQSLFYRFMIGD* 447
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02449 446 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 23 439 - -
Rops8g02449 446 Gene3D - 13 220 IPR023213 -
Rops8g02449 446 Pfam Transferase family 15 440 - -
Rops8g02449 446 Gene3D - 232 442 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02449 Rops-Chr8 56403518 56407481 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02449 15 440 Monolignol Biosynthesis Gene Families AT5G48930 30.425 2.88e-53 182
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02449 K13065 - gmx:100780971 727.628
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02449 8 56403518 56407481 Rops5g01993 5 42067984 42071767 PCT