Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02402 ATGGGTCTTGTTTTTCTTCTTCTTCTGTGTCTTCTCTTTCACCCTTTGGTCTTTTTCTTCACTACCCATCACGTAAATGCCCTCAATGCTTCGATTCCGAACGATGCATTGTGCCTTCTAAGCTTCAAAGACTCTGTATCTTCTGACCCTTTGAACCTTCTCGAAGATTGGACCAACCGTTCCTCTTCGAGTCTCTGCCTTTGGCACGGCGTCACATGCGGCGGCGACGGCAGATTAACGGCGTTGAAAGTTACCGGTCTTAATGGCGGAGAATTGGCGCCTTCCGTTGGAGACATGTCGGAGCTTCGTGTCCTGTCCATCCCCGGAAACATGTTTTCCGGCGATATTCCGGCGAGCATAGGGAATCTCCGGCGGCTTGAGGTTCTTGAGCTTCAAGGAAACAACTTTTCAGGGAAAGTCCCTTACCAGATTAGTTATCTTGAATCTGTTAGTTTTGTTAATTTTTCTGGTAATGCTTTTTCTGGTTCCATACCAAGTGAGTTGTTTGGTTCTGGGAATTTGAAAATTGTTGATTTATCTAATAATCAATTTTCTGGTCACGTTCCAGTGAATGGTTTTAGTGGTTGTGATTCCTTGAACTATTTGAAGCTGTCACATAACTTTTTAACTGGTGAGATTCCACCCCAAATTGGGAAATGTAGAAACTTGAGGACCCTTTTGGTTGATGGGAATATCTTGGAAGGTAGAATCCCTCCTGAGATTGGGAATATTGTTGAACTTAAAGTTCTAGATGTTTCTAGAAACAGCTTTACTGGAAGGATCCCTAGAGAGCTTGCTAATTGTTTGAAATTGTCTGTGCTTGTGCTTACTGATTTGTTCGATGATCACGGTAACAATATGGGAAGCTTGGGGGATAGCTTTAGAGGAGAATTCAATGCCTTTGTTGGGAATATTCCTCATGAAGTGTTGTTGCTTTCAAGTTTGCAGATTTTGTGGGCGCCGAGGGCGAATCTTGGTGGAAGGTTGCCTAGTGGATGGATTGATTCATGCCCTCTCAGAGTACTCAATTTGGCTGAGAATTATGTTACTGGTGTCATGCCTGAGAGTTTAGGGAAGTGTAGGAATTTAACTTTCTTGGATTTGAGTTCTAACAATTTAGTGGGATATCTGCCTTCCCAGCAGCTTCAGGTTCCTTGTATGACGTACTTCAATGTCAGCAGGAATAATATATCTGGCATGATTCCGGTATTTAGGACAGAAAGTTGTGGTGTGAATAGTAGTAACCCTGCTGCACTAGACCTTGCATTGCTAGAGTTGGTAGGTTTTAATGATGCATACTTCAGTGTTCCTGTTTTGAGATTTCAAAAGAATGCTTTCATTGGATCAGGTTTTGAAGAGACTATTGTAGTTAGCCATGATTTCAGTTGGAACAGTTTCATGGGATCCTTACCTTTGTTCTCTCTTGGAGATAATCTTTTTACTGCAAATCGTAAAGTTTCCTACATGTTATCTCTCAATAATAATAAGTTCAATGGAACTCTACCATACCAGCTAGTTTCAAACTGCAAGGACCTTAAGACATTGTCAGTTAACTTGAGTGTGAACCAACTATCCAGTTGGAATTCCCTAGCATTGTTTCAGGACTGCCTGCAGTTGACAGATTTTGAAGCAGCACACAACCTGATTGATGGGTCAATTGGTATAGGTGACTTGATGATGCTTCAGCATCTTGATTTAAGTGGGAACAAACTATCTGGACCACTGCCTAATCAGTTGGGAAACCTGAAAAACATGAAATGGATGCTTCTAGGAGGAAACAATCTAACAGGAGAAGTTCCTTCCCATCTTGGTCAAATGACTTCACTCACTGTTTTGAATCTGTCTCACAATGCTCTAATAGGAACAATTCCAGCAAGTTTGTCAAATGCCACAAGTCTTGAAATTCTGTTGCTAGATCACAACAATCTTTCTGGGGAAATACCTCTATCTTTTTCTGCTCTTTTCAATCTTGTTCAACTAGATGTTTCTTACAATAATCTTTCTGGCCATATTCCTCATCTTCAACACCCAAGTGATTGTGATTCCTATAAAGGGAATGAACACCTGCACTCTTGCCCTGATCCAAACTCCAACTCACCTGCTTCTCTTCCAGTCCCTCTTGAAGTCCACAATTTGCATAGACAGAGGAAATTAAGGACGGTGGTTATTGCTGTAGTCACTTCTGCTTCTGTGGTTATCTGCACACTTTTGGGGATAGTGTTTGTGATATTTTATGGGAGAAGTAAATTTGTTCGACTTAGCAGTATTAGAAGGCGACAGGTAGTGACCTTTCAAGATGTTCCAATAGAATTGAGTTATGACAGTGTGGTCTCAGCTACTGGAAATTTCAGCATTCGGTATCTTATTGGCACAGGTGGCTTTGGGTCAACTTACAAGGCAGAACTTTCCCCAGGTTTTCTTGTAGCCATAAAGAGGTTGTCCATAGGTAGATTTCAAGGCATTCAACAATTTGAAACAGAAATAAGGACGTTGGGGAGAATTCGACACAAGAATCTTGTGACTCTTATTGGCTATTATGTAGGAAAGGCTGAAATGTTCTTAATTTACAACTACCTTTCTGGTGGAAACCTTGAAGCTTTCATCCATGACAACTCAGGGAAAAATGCAAATCATACCCAACAGCAATGGAATGCTGATTTTGTTTGCTTGAAAACACTGAGATGA 2685 0.4112 MGLVFLLLLCLLFHPLVFFFTTHHVNALNASIPNDALCLLSFKDSVSSDPLNLLEDWTNRSSSSLCLWHGVTCGGDGRLTALKVTGLNGGELAPSVGDMSELRVLSIPGNMFSGDIPASIGNLRRLEVLELQGNNFSGKVPYQISYLESVSFVNFSGNAFSGSIPSELFGSGNLKIVDLSNNQFSGHVPVNGFSGCDSLNYLKLSHNFLTGEIPPQIGKCRNLRTLLVDGNILEGRIPPEIGNIVELKVLDVSRNSFTGRIPRELANCLKLSVLVLTDLFDDHGNNMGSLGDSFRGEFNAFVGNIPHEVLLLSSLQILWAPRANLGGRLPSGWIDSCPLRVLNLAENYVTGVMPESLGKCRNLTFLDLSSNNLVGYLPSQQLQVPCMTYFNVSRNNISGMIPVFRTESCGVNSSNPAALDLALLELVGFNDAYFSVPVLRFQKNAFIGSGFEETIVVSHDFSWNSFMGSLPLFSLGDNLFTANRKVSYMLSLNNNKFNGTLPYQLVSNCKDLKTLSVNLSVNQLSSWNSLALFQDCLQLTDFEAAHNLIDGSIGIGDLMMLQHLDLSGNKLSGPLPNQLGNLKNMKWMLLGGNNLTGEVPSHLGQMTSLTVLNLSHNALIGTIPASLSNATSLEILLLDHNNLSGEIPLSFSALFNLVQLDVSYNNLSGHIPHLQHPSDCDSYKGNEHLHSCPDPNSNSPASLPVPLEVHNLHRQRKLRTVVIAVVTSASVVICTLLGIVFVIFYGRSKFVRLSSIRRRQVVTFQDVPIELSYDSVVSATGNFSIRYLIGTGGFGSTYKAELSPGFLVAIKRLSIGRFQGIQQFETEIRTLGRIRHKNLVTLIGYYVGKAEMFLIYNYLSGGNLEAFIHDNSGKNANHTQQQWNADFVCLKTLR* 895
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02402 894 Gene3D Ribonuclease Inhibitor 34 191 IPR032675 -
Rops8g02402 894 FunFam LRR receptor-like serine/threonine-protein kinase RPK2 747 858 - -
Rops8g02402 894 Pfam Leucine Rich repeat 359 373 IPR001611 GO:0005515
Rops8g02402 894 SUPERFAMILY RNI-like 86 399 - -
Rops8g02402 894 ProSitePatterns Protein kinases ATP-binding region signature. 789 811 IPR017441 GO:0005524
Rops8g02402 894 Gene3D Ribonuclease Inhibitor 192 287 IPR032675 -
Rops8g02402 894 ProSiteProfiles Protein kinase domain profile. 783 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02402 894 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 191 280 - -
Rops8g02402 894 FunFam LRR receptor-like serine/threonine-protein kinase GSO1 456 701 - -
Rops8g02402 894 FunFam Leucine-rich repeat receptor-like protein kinase 32 190 - -
Rops8g02402 894 Gene3D Ribonuclease Inhibitor 288 449 IPR032675 -
Rops8g02402 894 Pfam Leucine rich repeat 173 231 IPR001611 GO:0005515
Rops8g02402 894 Pfam Protein tyrosine and serine/threonine kinase 787 878 IPR001245 GO:0004672|GO:0006468
Rops8g02402 894 Pfam Leucine Rich Repeat 608 629 IPR001611 GO:0005515
Rops8g02402 894 Pfam Leucine Rich Repeat 561 582 IPR001611 GO:0005515
Rops8g02402 894 Pfam Leucine Rich Repeat 247 268 IPR001611 GO:0005515
Rops8g02402 894 SUPERFAMILY Protein kinase-like (PK-like) 752 875 IPR011009 -
Rops8g02402 894 Pfam Leucine rich repeat N-terminal domain 33 73 IPR013210 -
Rops8g02402 894 Gene3D Ribonuclease Inhibitor 456 701 IPR032675 -
Rops8g02402 894 Gene3D Phosphorylase Kinase; domain 1 745 858 - -
Rops8g02402 894 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE FAMILY PROTEIN-RELATED 299 885 - -
Rops8g02402 894 SUPERFAMILY L domain-like 302 677 - -
Rops8g02402 894 PRINTS Leucine-rich repeat signature 606 619 - -
Rops8g02402 894 PRINTS Leucine-rich repeat signature 561 574 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02402 Rops-Chr8 55568359 55572360 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02402 34 875 Receptor kinase-like Gene Family AT3G02130 38.355 2.81e-168 518
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XV Rops8g02402 PK_Tyr_Ser-Thr 3.6e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02402 - - cam:101512699 1304.27