Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02359 ATGACTGGCGATGGTGTCAACGATGCTCCTGCTTTGAAGAAGGCCGATATTGGAATTCTTGTTCTTGATGCCAGCGATGCCGCAAGAAGTGCTTTTGATATTGTCTTGACAAAACCTGGATTAAGTGTTATCATTAGTGCCGTTTTGACTAGCATAGCTATTTTCCAAAGAATGAAAAACTACACGATATATGCAGTATCCGTCACCATCCGTATAGTGTTTGGTTTCATGTTCATTGCACTGATCTGGAAATTCGACTTCTCTCCTTTCATGGTTTTGATTATTGCTATTCTAAATGATGGTGAACAATTCTGGGTCTTGGTTTTCTTGACTTGGTCATCAGGTTCCTCTGGTTTGGCTGTGTCTGGAACCTTGAAGCTTTACGATTGCTTGCAAATGCTATGA 405 0.4074 MTGDGVNDAPALKKADIGILVLDASDAARSAFDIVLTKPGLSVIISAVLTSIAIFQRMKNYTIYAVSVTIRIVFGFMFIALIWKFDFSPFMVLIIAILNDGEQFWVLVFLTWSSGSSGLAVSGTLKLYDCLQML* 135
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02359 134 SUPERFAMILY HAD-like 1 95 IPR036412 -
Rops8g02359 134 PRINTS P-type cation-transporting ATPase superfamily signature 25 37 - -
Rops8g02359 134 PRINTS P-type cation-transporting ATPase superfamily signature 2 21 - -
Rops8g02359 134 Gene3D - 40 105 - -
Rops8g02359 134 PANTHER CALCIUM-TRANSPORTING ATPASE 1 102 - -
Rops8g02359 134 Gene3D - 1 39 IPR023214 -
Rops8g02359 134 PRINTS H+-transporting ATPase (proton pump) signature 33 58 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
Rops8g02359 134 PRINTS H+-transporting ATPase (proton pump) signature 2 18 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02359 Rops-Chr8 54659754 54661298 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02359 1 101 Primary Pumps ATPases AT2G24520 91.089 1.26e-56 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02359 K01535 - gmx:100806580 182.185