Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02349 ATGGAGAACCTTGCTGAAAATTCCGGCAGTTTCGCTCGCAGAGACGAGCAGAACAACGCTGGAGACACGCCGCATTCTACTATTCCTGAGGGTTCCACCACCGAAGCGGATCCCAAACCTGAAGGCGACACCGCCGAAGCGGAACCCAAACCTGAAGGTGACACCGCAGAAGCGGTACCACCGGCGGTGCAACAGGGAGATAATGCGGAAGAGGAGAAGAAAGAAGAGGCGGAGGAGTTTCCTCCACCGAGCCTCGAGAAGGTTTCAGAAGACATTGATCAGTGGCTCTTGACTCTGCAACAGAACAATGATAATAACGAGAACAAGAATGAAGATGCAGAGAAAAAAGAGTCGATTGAGATCCCTGGTTTCGTTGAAAGGTTCTTGGATTTGGTGGAGGAGAAGATAGGGAAGTATGACAAAGGAGAAGGCAAAGGCAAATGGGGAGAGGTGGCGGAGGAAGATTCGTGGTTGTTAGAAACTGTGAATCGGATTTCGAAACTGATGAAATCTCTGACTCTGACTCAGATTCATCATCATCATCATGAAACCTCAGAAGAAGAGATCAAAACAAAAACAGACTCACTGGTGAACCGCATTGGCTCGATCCAACACCGTGCGATGTCGTATTTGGAGGAAGACTTTCGGTGGTTAATGGAAGAATCTAGAAGCCCAACAGAATTAGACCCTGGTGGAAATAACCAGAACGTCGACCCCAAAGGGAAACACGTGGCAGCACCAGAACAACAACAACCGGATCCGAATCAGGATCAACAACCCGAGGAATTCGTAACGAATTTCCCGGGTTACCCGGACGAAGCCATTGCCAGCCTGAGGAAGATCGCCGGCGAGATGTTGGCCAGCGGCTACGAATCTGAGTGCTGCCAGGTGTACATCATGGCGAGAAGGAACGCGTTCGAGGAGATTCTCCAGAAGCTAGGGTTGGAGAAGATCAGCATCGACGAGATGATTCAGAAGGTGCAATGGGAGACCCTTGCCGGGACCATGATCCCCGCGTGGATCAATACGTTCCGGCAATGCGCCGCCGTGTACTTCCCCGGAGAGAGGAAACTGGTGGAGACAGTGTTCGCGGATTACCCGTCGATTTCTGCCGGACTCTTCAGCAGCCTCTCACGTGGAGTCGTGATTCAGCTCCTCAACTTCGCGGAGGGCGCCGCCATGACGAAACGCGCCGGTGAAAAACTCTTCAAGCTCCTCGACATGTTCGAGACGCTCCGGGACATAATCCCAAAACTAGATGAACTCTTTCCTGAAGAATTCGTCGAGGAGATGAAGACAGAGATGAACGTCGCCAAGTCACGGCTTGGCGAGGCAGCAATCTCCATCTTCTGCGACCTTGAGAATTCGATAAAATCGGAAACAGCAAAAACTCCGGTTCCCGGCGGCGCGGTTCACCCTCTCACACGCTACATAATGAACTACCTCAACACAGCAGGGGATTACAAGGACACACTGGAGCAGGTTTTCAAGGAGCATTCAAAAATCGAGCGTGCCGATTCAACCAGCAGGCCACAGCACGAAAACGACGTCGTTGCTGAAAAAGAGTGTTCTTCCCCTTTCGCGGCGCAGGTTATGAGGGTGATGGACTTGCTTGATTCAAGCCTTGAAGGGAAGTCCAGACTGTACCGTGACGTGGCACTGACCAACTTCTTCATGATGAACAACGGAAGATACACTCTTCAGAAGATCAAAAGTTCCCCTGAGATGAGACAGGTGATGGGTGACACGTGGTGTCGTAAGAGATCCTCAGAGCTGAGAAACTTCCATAAGAATTACCAGAGGGAAACGTGGAACCGTGTGGTCGCTTGTTTGAGCCATGAAGGGTTGAATGTGAATGGTAAGGTGCAGAAGCCGGTGTTGAAGGAGAGGTTCAAGAGCTTCAACGCGCTTTTCGATGAGATTCACAAGACCCAGAGCACGTGGGTGGTGAAGGACGAGCAGCTTCAATCGGAGCTTAGGGTTTCGATATCGGCGGTGGTTATTCCGGCGTACAGGACATTCCTTGGGAGGTTTGCACAGTACATGGATCCGGGGAGACAGACGGAGAAGTATATAAAGTACCAGGCTGAGGATATAGAGAATTATATTGATGATTTGTTTGATGGGAAGCCTCACCAATCCATGGCTAGAAGGAGACCATAA 2163 0.5076 MENLAENSGSFARRDEQNNAGDTPHSTIPEGSTTEADPKPEGDTAEAEPKPEGDTAEAVPPAVQQGDNAEEEKKEEAEEFPPPSLEKVSEDIDQWLLTLQQNNDNNENKNEDAEKKESIEIPGFVERFLDLVEEKIGKYDKGEGKGKWGEVAEEDSWLLETVNRISKLMKSLTLTQIHHHHHETSEEEIKTKTDSLVNRIGSIQHRAMSYLEEDFRWLMEESRSPTELDPGGNNQNVDPKGKHVAAPEQQQPDPNQDQQPEEFVTNFPGYPDEAIASLRKIAGEMLASGYESECCQVYIMARRNAFEEILQKLGLEKISIDEMIQKVQWETLAGTMIPAWINTFRQCAAVYFPGERKLVETVFADYPSISAGLFSSLSRGVVIQLLNFAEGAAMTKRAGEKLFKLLDMFETLRDIIPKLDELFPEEFVEEMKTEMNVAKSRLGEAAISIFCDLENSIKSETAKTPVPGGAVHPLTRYIMNYLNTAGDYKDTLEQVFKEHSKIERADSTSRPQHENDVVAEKECSSPFAAQVMRVMDLLDSSLEGKSRLYRDVALTNFFMMNNGRYTLQKIKSSPEMRQVMGDTWCRKRSSELRNFHKNYQRETWNRVVACLSHEGLNVNGKVQKPVLKERFKSFNALFDEIHKTQSTWVVKDEQLQSELRVSISAVVIPAYRTFLGRFAQYMDPGRQTEKYIKYQAEDIENYIDDLFDGKPHQSMARRRP* 721
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02349 720 Coils Coil 96 119 - -
Rops8g02349 720 Pfam Exo70 exocyst complex subunit 339 705 IPR046364 GO:0000145|GO:0005546|GO:0006887
Rops8g02349 720 Gene3D Exocyst complex component Exo70 152 717 - -
Rops8g02349 720 SUPERFAMILY Cullin repeat-like 159 708 IPR016159 -
Rops8g02349 720 MobiDBLite consensus disorder prediction 1 33 - -
Rops8g02349 720 FunFam Exocyst subunit Exo70 family protein 143 715 - -
Rops8g02349 720 MobiDBLite consensus disorder prediction 36 53 - -
Rops8g02349 720 MobiDBLite consensus disorder prediction 1 91 - -
Rops8g02349 720 MobiDBLite consensus disorder prediction 67 86 - -
Rops8g02349 720 MobiDBLite consensus disorder prediction 249 263 - -
Rops8g02349 720 PANTHER EXOCYST COMPLEX PROTEIN EXO70 129 709 IPR004140 GO:0000145|GO:0006887
Rops8g02349 720 MobiDBLite consensus disorder prediction 222 266 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02349 Rops-Chr8 54411249 54413539 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02349 66 719 EXO70 exocyst subunit family AT5G13990 51.929 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02349 K07195 - gmx:100820172 949.118
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02349 8 54411249 54413539 Rops5g02075 5 44500680 44503115 PCT