Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02346 ATGATCAATTCACTGTGTGGAAGCTCAGTGTCACTCAAGAGTGAGAACTCCAGAACCAAACTTCAACCCACTTCTTCAAATGACTCAGTTTTACAACAGTCTAAGAAAAATGCCACTCAATCCTCTGCTGATTTAGAGCAGACTAGTCTAACCCCACCAAGCTTAAACCTTCCTGCGCTCAAATTTGACTTGGATGGTGATGTGGAAGTCCAATCACCAGACAGTGCAATGTGGGAATCCTTTTTCTCTGATCATTTAGATGGTGATTTCATGATCTCTTCTCCAGTGAGGAACGTTCCTCCCCCTCAAGCTTCTACCTACAACTGCAACTATAACTATGCTCAGGGAATGCAAGGTCAGAGTCTTACTGGGTGTTCACCACCTCGTTTTTCATCCCAAGTTGGAGCCTTTAACGGTGGCCACAAAGGGAAAGGACTTAGTCCACTCCACAGGGTATTTAACTCACCAAACAATCAGTACATGCAACATGTGGAGAACCTTTCACTGCCAGCTATAGAAGAGTTCTTGGAGGATTATCAAGGAGATGGGTTAGGTGGAGGATATTCATCAACCAAGGTGTCTTCTGATATTGGAAGTTCATCTGAATGCTTTGACATGCCAACTCAGATTCCATCCATCTTGGATAGCTTGACAATGCCCGATTCCTCAAGGTATTGTGGATCAGTTAATGAAGAATCATCAGTGCATGGTGGTTCCTCTCAACTCTCCCAAGAGAGTGATATCTATCATCAGATGGGGTCCATGGCTAGTGCTTCCCTCTCACAAGCTTTACTACAAGAACGCTACCAAGAGAAACATCAAAAACAGCAAATACAACAACAACAACAACAAAGTCTCACAGTGCCTGTTCCAAATGTAGTCGACCAGGAGCAAGACAGTGGACTTCAATTGGTGCACCTACTACTAGCTTGTGCTGAGGCAGTAGCCAAAGAGGAATACATGCTAGCAAGAAGGTACCTGCACCATCTCAACAGAGTAGTATCACCACTAGGCGACTCCATGCAGCGTGTAGCTTCATGCTTCACAGAATCACTAAGTGCAAGACTCGCTGCAACACTCACCTCCTCCAACACAACCAAATCACCACCATCATCATCATCATGTCTCACAGGTCCATCAAAATCCATAGAAATCCTCAAGATCTACCAAATCGTCTACCAAGCTTGCCCTTACGTCAAATTCGCACACTTCACTGCCAATCAAGCCATCTTCGAAGCCTTCGAGGCCGAGGAACGTGTCCACGTCATCGACCTCGACATCCTCCAGGGCTACCAGTGGCCGGCGTTCATGCAAGCCCTGGCTGCACGTCCAGGTGGCGCTCCGTTCCTCCGGATAACCGGCGTGGGACCGAACATTGAATCGGTTAGGGAAACTGGACGGTGCTTAACGGAGTTAGCTCACTCTCTTCGCATCCCCTTTGAATTCCACCCTGTAGGGGAACAACTTGAGGACCTGAAGCCTCACATGTTTAACCGTCGAGTCGGCGAGGCGTTGGCGGTTAACACCGTTAACCATCTCCACCGTGTTCCCAGTAACCACCTTGGAAACTTGTTGTCCATGATAAGGGACCAAGCACCAAACATAGTGACTCTCGTGGAGCAAGAGGCAAGCCATAATGGACCTTATTTTCTTGGGAGGTTCCTCGAAGCTCTGCATTATTACTCGGCCATTTTTGATTCCTTGGATGCGACATTTCCACCGGAATCAGTGCAGAGGGCGAAGGTGGAGCAGTACATATTCGCGCCGGAGATAAGGAACATCGTGGCGTGTGAGGGAGCAGAGAGGATAGAGAGGCATGAGAGGTTGGAGAAGTGGAGGAAGATAATGGAAGGGAAAGGGTTCAAAGGGGTGCCACTGAGTCCCAACGCGGTTACTCAGTCAAGGATATTGCTTGGTTTGTACTCGTGTGATGGGTATAGGTTGAATGAGGATAAGGGTTGTTTGCTTCTTGGGTGGCAGGACAGAGCCATTATTGCAGCCTCTGCATGGCGTTGCTGA 2019 0.4794 MINSLCGSSVSLKSENSRTKLQPTSSNDSVLQQSKKNATQSSADLEQTSLTPPSLNLPALKFDLDGDVEVQSPDSAMWESFFSDHLDGDFMISSPVRNVPPPQASTYNCNYNYAQGMQGQSLTGCSPPRFSSQVGAFNGGHKGKGLSPLHRVFNSPNNQYMQHVENLSLPAIEEFLEDYQGDGLGGGYSSTKVSSDIGSSSECFDMPTQIPSILDSLTMPDSSRYCGSVNEESSVHGGSSQLSQESDIYHQMGSMASASLSQALLQERYQEKHQKQQIQQQQQQSLTVPVPNVVDQEQDSGLQLVHLLLACAEAVAKEEYMLARRYLHHLNRVVSPLGDSMQRVASCFTESLSARLAATLTSSNTTKSPPSSSSCLTGPSKSIEILKIYQIVYQACPYVKFAHFTANQAIFEAFEAEERVHVIDLDILQGYQWPAFMQALAARPGGAPFLRITGVGPNIESVRETGRCLTELAHSLRIPFEFHPVGEQLEDLKPHMFNRRVGEALAVNTVNHLHRVPSNHLGNLLSMIRDQAPNIVTLVEQEASHNGPYFLGRFLEALHYYSAIFDSLDATFPPESVQRAKVEQYIFAPEIRNIVACEGAERIERHERLEKWRKIMEGKGFKGVPLSPNAVTQSRILLGLYSCDGYRLNEDKGCLLLGWQDRAIIAASAWRC* 673
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02346 672 ProSiteProfiles GRAS family profile. 295 671 IPR005202 -
Rops8g02346 672 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 258 666 IPR005202 -
Rops8g02346 672 Pfam GRAS domain family 304 671 IPR005202 -
Rops8g02346 672 MobiDBLite consensus disorder prediction 1 54 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02346 Rops-Chr8 54284718 54287756 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02346 267 672 GRAS Transcription Factor Family AT1G66350 42.579 7.86e-102 318
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Rops8g02346 GRAS 1.8e-132 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02346 - - gmx:100805039 1038.87