Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02339 ATGGATCCCAAGGGCTCAAAGCAGACACAGGGACAGGAGATACCCAACTTCCTGAGCCTCCCACAGCCACAACAACAAGAAGGGAACAACAACAACAATATGGGAGAGAACAAGCCAGCAGAGGTTAAGGATTTCCAGATAGCGATCGCTGATAAAGAAGAGAGCAAGAAGCAGTTAGCACCAAAGAGGAGTTCCAACAAGGACAGGCACACCAAGGTTGAAGGTAGGGGAAGGAGGATAAGGATGCCTGCTTTATGTGCAGCTAGAATCTTCCAGTTGACCAGAGAATTGGGTCACAAATCTGATGGGGAAACCATTCAGTGGCTCCTTCAACAGGCTGAGCCATCTATAATAGCAGCTACTGGGACTGGCACAATCCCAGCATCTGCTTTGGCTGCTGCTGGTAACTCTGTTTCACAACAGGGGACCTCTTTATCTGCTGGGTTGCACCAAAAGATTGATGAATTAGGAGGGTCCAATATTGGGTCAGGGAGTAGGACCAGCTGGGCAATGGTTGGAGGGAATTTGGGGAGACCCCATGTGGCCACTGGTTTATGGCCCCATGTCAGTGGATTTGGATTTCAGTCATCATCCGGTCCATCTACAGCCAGTTTGGGCAGTGAGAGTTCAAATTACCTCCAAAAGATTGGGTTTCCTGGCTTTGACTTGCCTTCCACCAACATGGGTCCTATGAGTTTCACCTCAATTTTAGGTGGGGGTGGTAACCAGCAGATGCCTGGTTTGGAGCTGGGTTTGTCTCAAGATGGTCATATTGGGGTTTTGAATCCACAAACCTTGAGTCAGATTTATCAGCAGATGGGTCAAGCTAGAGTACACCATCAGCAGCAGCAGCAGCCTCCTACTAAGGATGATTCTCAAGGTTCAGGACAGTAG 894 0.4888 MDPKGSKQTQGQEIPNFLSLPQPQQQEGNNNNNMGENKPAEVKDFQIAIADKEESKKQLAPKRSSNKDRHTKVEGRGRRIRMPALCAARIFQLTRELGHKSDGETIQWLLQQAEPSIIAATGTGTIPASALAAAGNSVSQQGTSLSAGLHQKIDELGGSNIGSGSRTSWAMVGGNLGRPHVATGLWPHVSGFGFQSSSGPSTASLGSESSNYLQKIGFPGFDLPSTNMGPMSFTSILGGGGNQQMPGLELGLSQDGHIGVLNPQTLSQIYQQMGQARVHHQQQQQPPTKDDSQGSGQ* 298
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02339 297 MobiDBLite consensus disorder prediction 1 37 - -
Rops8g02339 297 MobiDBLite consensus disorder prediction 45 76 - -
Rops8g02339 297 MobiDBLite consensus disorder prediction 272 297 - -
Rops8g02339 297 ProSiteProfiles TCP domain profile. 66 120 IPR017887 -
Rops8g02339 297 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 12 262 IPR005333 GO:0003700
Rops8g02339 297 Pfam TCP family transcription factor 65 150 IPR017887 -
Rops8g02339 297 MobiDBLite consensus disorder prediction 1 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02339 Rops-Chr8 54165723 54167151 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02339 1 297 TCP Transcription Factor Family AT3G27010 56.575 2.11e-91 272
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Rops8g02339 TCP 3.2e-31 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02339 - - cave:132180810 468.774