Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02329 ATGGGTGTGTTGCAGGAGAAGCTTTTGTCCTTTTACAAGAGTAGATGGCTTGTTTTTGTGGCTGCAATGTGGTTACAATCATGGGCTGGTATTGGGTACTTATTTGGAAGCATATCACCTGTGATAAAGAGTTCTCTTAACTATAATCAAAAGCAGCTTGCCATGTTGGGTGTGGCTAAGGACCTTGGTGACGCTGTTGGGTTCATCACTGGGGTGTTGTGTGAGATTTTGCCTATTTGGGGTGCTTTGCTTGTTGGGGCCACTTTGAACCTTGTTGGGTATGGTTGGGTTTGGTTGATTGTTATTGGCCAAGTTCCTGCTCTCCCTTTATGGGCTATGTGTGTTCTCATATTTGTGGGAACAAATGGTGAAACCTACTTCAACACAGTTTCTCTTGTGTCTTGTGTGCAAAATTTCCCCAAAAGCCGGGGTCCTGTGGTTGGAATTCTAAAGGGCTTTGCTGGGTTGAGTGGTGCAATCTTGACACAAATATATGCAGTTGTCCATTCCCCTGATCATGCATCATTGATATTTATGGTTGCAGTAGGTCCAACATTGGTAGCTATAGGTCTGATGTTCATTGTTAGACCTGTTGGAGGTCACAAACAAGTGCGGCCATCCGATGGTAAAAGCTTCACATTTGTCTATGGTGTGTGCCTCCTATTGGCTGCTTATTTGATGGGAGTCATGGTTGTCCAAGATCTAGTTGATCTGAGCCAAACTGTTATCACACTGTTTACAGTTATCCTCTTTTTGATCCTCCTTGTCCCAATTGTGATTCCTGTCTCATTGAGTTTTGGCCCAGAGCAAAAACCTATAGAGGAAGAGGCACTTCTTCCAGAACCACAGAATAATGAACCAGGAAAATCTCAATTAGATGGTGAAGAAGTAATATTAAGTGAGTTGGAAGATGAGAAGCCTAAGGAAGTGGACTTGCTCCCTGCATCTGAAAGGAAGAAACGTATAGCCCAATTACAATCAAGACTACTCCAAGCAGCTGCAGAAGGAGCAGTGAGGGTTAAGAGGAGGAGAGGACCACACAGAGGGGAGGATTTTACCTTGACACAAGCTTTGATTAAAGCTGACTTTTGGCTTCTTTTCATTTCCATGATCATGGGTTCTGGATCCGGGTTGACTGTAATTGACAATCTGGGTCAGATGAGCCAGTCTCTAGGATATGACAATGCCCATATATTTGTCTCCATGATCAGTATTTGGAACTTCCTTGGACGTGTTGGAGGGGGTTACATATCTGAGATTGTTGTGAAGGATCATGTCTATCCAAGGCCTGCTGCATTGGCTGTATTTCAACTTGTTATGACTGCTGGGCATGTTTTCATTGGTATGGGATGGCCAGGGTCAATGTATGTTGGCACTTTACTTGTTGGACTTGGTTACGGGGCTCACTGGGCAATTGTTCCCGCTACTGCCTCTGAGTTGTTTGGTTTGAGAAACTTTGGTGCATTGTACAATTTCATCACTCTGGCAAACCCTGCAGGAACTCTTGTCTTCTCTAGTCTCATTGCCAGCAGAATCTATGATCATGAAGCAGAGAAACAAGCTCATGGTGGCAATCACCTTCACCAGAATATAGGATCATTTGCATTGCGTGTGCTTAACGTTGGTGAGCCACTAAAGTGCGAAGGTTCCGTATGTTTTTTCCTGACTTCCATTATCATGGCAGGATTATGCATTGTTGCATCAGGCTTGTGCATGATTCTCGTGTTTCGAACTAGGATTGTTTATGCCAACCTATATGGAAAACCTTCAACTAGTAGGCTTCGATAA 1788 0.4379 MGVLQEKLLSFYKSRWLVFVAAMWLQSWAGIGYLFGSISPVIKSSLNYNQKQLAMLGVAKDLGDAVGFITGVLCEILPIWGALLVGATLNLVGYGWVWLIVIGQVPALPLWAMCVLIFVGTNGETYFNTVSLVSCVQNFPKSRGPVVGILKGFAGLSGAILTQIYAVVHSPDHASLIFMVAVGPTLVAIGLMFIVRPVGGHKQVRPSDGKSFTFVYGVCLLLAAYLMGVMVVQDLVDLSQTVITLFTVILFLILLVPIVIPVSLSFGPEQKPIEEEALLPEPQNNEPGKSQLDGEEVILSELEDEKPKEVDLLPASERKKRIAQLQSRLLQAAAEGAVRVKRRRGPHRGEDFTLTQALIKADFWLLFISMIMGSGSGLTVIDNLGQMSQSLGYDNAHIFVSMISIWNFLGRVGGGYISEIVVKDHVYPRPAALAVFQLVMTAGHVFIGMGWPGSMYVGTLLVGLGYGAHWAIVPATASELFGLRNFGALYNFITLANPAGTLVFSSLIASRIYDHEAEKQAHGGNHLHQNIGSFALRVLNVGEPLKCEGSVCFFLTSIIMAGLCIVASGLCMILVFRTRIVYANLYGKPSTSRLR* 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02329 595 SUPERFAMILY MFS general substrate transporter 213 579 IPR036259 -
Rops8g02329 595 SUPERFAMILY MFS general substrate transporter 8 201 IPR036259 -
Rops8g02329 595 Gene3D MFS general substrate transporter like domains 310 526 IPR036259 -
Rops8g02329 595 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 16 583 - -
Rops8g02329 595 CDD MFS_Mch1p_like 14 567 - -
Rops8g02329 595 Pfam Nodulin-like 15 262 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02329 Rops-Chr8 53609950 53613851 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02329 5 591 Nodulin-like Gene Family AT5G14120 70.508 0.0 833
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02329 - - aprc:113861924 1020.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02329 8 53609950 53613851 Rops8g02329 8 53609950 53613851 ECH