Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02301 ATGATAATGGAGATCCAATGTGTAGAAGCAGCGTCGAAACCACTCAACGAAGTCTCTATCGTCCTTTCTATTCTCCAAGCGAAGAAGGTTTTCATATCCATTTGGTCGGGTTCGAAGTTGAAAGAAATGGCTGGACAATCGGACCATGAGCTCTCACTATTTTCAGCGGAGGAGCTTGAGTTCATCGCCGAGGATGAGATCGTGGATATTGTACCCAATCTCAAAATGGGTCCTCTCAATCTCCTCTCTGGAGATTTTGGCCCATTTACGCCACAGATTGTTACTCAAGTTCCCCTGTGGCTAGCCATTGCCCTCAAGAAGAGAGGCAAGTGTTCAATTTGCCCTCCCCAATGGATGTCTGTTGAGAAGTTGACTCAAGTTTTGGAGGCAGAGCGAGACTCTCAAGAGATGTCGGAGCAATTGCCATTTCATTATGTAGAAATCTCAAGACTTCTTTTTGACCATGCACGTGACAACATTCCCGACGTATATATGGTGAGGTCTCTAATTGAGGACATCAGAGATGTAAGGTTTCATAAAGTTGAAACATACTTGGAGGCAATTAAAAGTCGTACAATTGCTGTTAAGATAAAAAATTTATCTGCAATGGAAGTGAATATTTTTCGCCCATTTATTGGAAGAGCTTTACAGGCATTTTATAAGCATGACAGTCCAGAGTTGATCCCAGACCCAGAGAGAGATCCTGACAGACGGCCACAAGTTGTCAACAATGCCCCAAGAAGGCAACTTCGAAGATAA 759 0.4335 MIMEIQCVEAASKPLNEVSIVLSILQAKKVFISIWSGSKLKEMAGQSDHELSLFSAEELEFIAEDEIVDIVPNLKMGPLNLLSGDFGPFTPQIVTQVPLWLAIALKKRGKCSICPPQWMSVEKLTQVLEAERDSQEMSEQLPFHYVEISRLLFDHARDNIPDVYMVRSLIEDIRDVRFHKVETYLEAIKSRTIAVKIKNLSAMEVNIFRPFIGRALQAFYKHDSPELIPDPERDPDRRPQVVNNAPRRQLRR* 253
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02301 252 MobiDBLite consensus disorder prediction 226 252 - -
Rops8g02301 252 Gene3D - 54 119 - -
Rops8g02301 252 SUPERFAMILY GINS helical bundle-like 115 223 IPR036224 -
Rops8g02301 252 FunFam DNA replication complex GINS protein PSF2 120 235 - -
Rops8g02301 252 PIRSF GINS_PSF2 44 252 IPR007257 GO:0005634|GO:0006260
Rops8g02301 252 CDD GINS_A_psf2 108 224 - -
Rops8g02301 252 Gene3D - 120 227 - -
Rops8g02301 252 MobiDBLite consensus disorder prediction 226 241 - -
Rops8g02301 252 FunFam DNA replication complex GINS protein PSF2 54 119 - -
Rops8g02301 252 CDD GINS_B_Psf2 55 116 - -
Rops8g02301 252 Pfam GINS complex protein 95 204 IPR021151 -
Rops8g02301 252 SUPERFAMILY PriA/YqbF domain 54 113 - -
Rops8g02301 252 PANTHER DNA REPLICATION COMPLEX GINS PROTEIN PSF2 49 246 IPR007257 GO:0005634|GO:0006260
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02301 Rops-Chr8 52975776 52983297 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02301 43 189 Core DNA Replication Machinery Family AT3G12530 68.027 1.02e-72 217
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02301 K10733 - gmx:100780528 360.533