Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02263 ATGCCAAGTGTGGCTGTGAAGCTCTATAGCGTGTTCTTCAAGTTCCTCTTGAAGCACCGTTTACAAAACCGGATTCAAGCCCCACCCGACCCGTTTGGTGTGACCTCACGACCCGAAGAATCCGTCGCTGCCGCTAACCCTTCCTTCACCGACGGCGTTGCTACCAAAGACATTCACATCGATCCTTTTACCTCTCTCGCTATTCGAATCTTCCTTCCTGAATCAGCACTATCCCCACCCGAACCTCATTCCAAACCTCACCCAATTCCCAAACCTAGGTCCAACCCTATCCCCCCGAAGCCCGATCCAGAATCTGGATCTGCACGTATCGACTCGAAATCGCGGCGAAATAGTTATGGCCCTCCGCACCGGGAAGAGCCACGAGGGAACAACTTCGGAGCTAGCAATGGAGTCGAGGGTTTGAATTTAATGTCCGGCGGCGGCGGTTATCGTGGTTACTCTCCGGCGCTGGATAATCGCAGGAGGAAATTGCCGGTGATGTTGCAGTTTCACGGTGGTGGTTGGGTCAGCGGGAGCCATGATTCCGTCTCTAATGATGTCTTTTGCCGGCGGATCTCGAAGCTTTGTGATGTGATCGTGGTTGCCGTTGGGTACCGGTTGGCGCCGGAGAGTCGGTTCCCGGCAGCGTTTGAGGATGGGTTGAAGGTGTTGAATTGGTTGGCCAAGCAGGCGAATTTGTCTGAGTGTAGTAAGTCGATGGGGATTGGAAGGGTTGGAGGTGGTGGTTATGAGTTTAACAAATCAGATGCTCGTAAGCACATTGTTGATTCGTTTGGAGCTTCAATGGTTGAGCCTTGGTTGGCTACTCATGGAGATCCATCAAGATGTGTGCTTCTTGGAGTGAGTTGCGGTGCAAATATTGCAGACTATGTGGCTCGAAAAGCTGTGGAAGGAGGCAAACTTCTGGACCCTGTCAAGGTGGTAGCACAGATCCTGATGTATCCATTTTTTGTTGGAAGTGTTCCCACACATTCTGAAATAAAATTGGCAAACTCTTACTTTTATGACAAGGCCATGTGTATGCTTGCATGGAAACTTTTCCTACCCGAGGAAGAATTTAGTTTGGACCACCCAGCTGCTAATCCCCTAGTCCCAGGCCGGTCTCCTCCTTTAAAGCTGATGCCTCCAACATTGACAGTGGTGGCAGAACATGACTGGATGAGGGATCGTGCCATTGCTTACTCAGAGGAGCTCCGGAAGGTGAACGTTGATGCACCTGTTCTTGAGTATAAGGATGCAGTACATGAATTTGCAACACTTGATGTACTTCTCAAAAGCCCTCAGGCCCAGGTTTGTGCTGAGGACATAGCCATCTGGGTCAAGAAATATATTTCACTTCGGGGTCATGAATTCTCATATTGA 1383 0.5004 MPSVAVKLYSVFFKFLLKHRLQNRIQAPPDPFGVTSRPEESVAAANPSFTDGVATKDIHIDPFTSLAIRIFLPESALSPPEPHSKPHPIPKPRSNPIPPKPDPESGSARIDSKSRRNSYGPPHREEPRGNNFGASNGVEGLNLMSGGGGYRGYSPALDNRRRKLPVMLQFHGGGWVSGSHDSVSNDVFCRRISKLCDVIVVAVGYRLAPESRFPAAFEDGLKVLNWLAKQANLSECSKSMGIGRVGGGGYEFNKSDARKHIVDSFGASMVEPWLATHGDPSRCVLLGVSCGANIADYVARKAVEGGKLLDPVKVVAQILMYPFFVGSVPTHSEIKLANSYFYDKAMCMLAWKLFLPEEEFSLDHPAANPLVPGRSPPLKLMPPTLTVVAEHDWMRDRAIAYSEELRKVNVDAPVLEYKDAVHEFATLDVLLKSPQAQVCAEDIAIWVKKYISLRGHEFSY* 461
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02263 460 Pfam alpha/beta hydrolase fold 167 425 IPR013094 GO:0016787
Rops8g02263 460 MobiDBLite consensus disorder prediction 106 123 - -
Rops8g02263 460 MobiDBLite consensus disorder prediction 79 103 - -
Rops8g02263 460 Gene3D alpha/beta hydrolase 145 455 IPR029058 -
Rops8g02263 460 SUPERFAMILY alpha/beta-Hydrolases 48 451 IPR029058 -
Rops8g02263 460 MobiDBLite consensus disorder prediction 77 137 - -
Rops8g02263 460 PANTHER ARYLACETAMIDE DEACETYLASE 37 425 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02263 Rops-Chr8 52070260 52074448 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02263 1 460 Carbohydrate Esterase AT3G27320 72.747 0.0 665
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02263 - - gmx:100775445 746.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02263 8 52070260 52074448 Rops8g02263 8 52070260 52074448 ECH