Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02257 ATGTTCGTAGGTGGTTCTTCCCCACTCACTTCAAAGAGGAGAAGGGTCACCAACATTTATTCAACCCACATGGATACTGAAGCTGCTAATGCCAAGATTGCAGCTATGAAAGAAAGATTTGGACGAGAGATCCATGTTTTTGAAACATCAGCTCTTTCTCCATCTTCAAATGCTGTGTCATCCAATGAAGAGGAGACTGATGACTTCTATGAGTTTACCGCGGAAGATTATCACCGGATTTTGGCTACTAAAAAGGAAGATAAATTCTTGAAGACTCGAAAAATCCGAGAAGCAGAAGAGGCATCTCGTAGGTCAAGAATAACCAAGGCTGTAATTAGAGTTCGCTTCCCTGATAATCACACATTGGAGGCTACCTTCCACCCATCAGAAACAGTCCAGAGTTTAATTGATCTCCTCAGTAAAGTGATTGCAAAGCCAGAGCAGCCATTTCATATATATACGACTCCGCCCAAGAAGCTGATCAATGATATGTCTCAGGATTTTTATACTGCTGGCTTTTGTCCTGGTGCCATCGTGTACTTTTCATATAATGTTCCCAAAGGTGATAGCACTGTGGTTGACCATATTGGTCCTTACCTACGTGAAGAGATCTTGTCTTTGAAAGGTTTGGATGTTGCTAATGATCAAGGCCAACAATCTGAGCCTGTTCAGTGTGCACCAGAGCCTGTTGAAACAACACAACCTGTTCCTGTCCAAGAACGTAAACCTGCTGAGAAAAAGCTTGTTAAACCAAAGTGGCTCAGAATGTGA 771 0.4241 MFVGGSSPLTSKRRRVTNIYSTHMDTEAANAKIAAMKERFGREIHVFETSALSPSSNAVSSNEEETDDFYEFTAEDYHRILATKKEDKFLKTRKIREAEEASRRSRITKAVIRVRFPDNHTLEATFHPSETVQSLIDLLSKVIAKPEQPFHIYTTPPKKLINDMSQDFYTAGFCPGAIVYFSYNVPKGDSTVVDHIGPYLREEILSLKGLDVANDQGQQSEPVQCAPEPVETTQPVPVQERKPAEKKLVKPKWLRM* 257
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02257 256 SUPERFAMILY Ubiquitin-like 84 181 IPR029071 -
Rops8g02257 256 MobiDBLite consensus disorder prediction 240 256 - -
Rops8g02257 256 ProSiteProfiles UBX domain profile. 105 181 IPR001012 GO:0005515
Rops8g02257 256 PANTHER PLANT UBX DOMAIN-CONTAINING PROTEIN 1 1 256 IPR044232 GO:0032984|GO:0051117
Rops8g02257 256 CDD UBX2_UBXN9 110 183 - -
Rops8g02257 256 MobiDBLite consensus disorder prediction 216 256 - -
Rops8g02257 256 Pfam UBX domain 108 175 IPR001012 GO:0005515
Rops8g02257 256 Gene3D - 39 180 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02257 Rops-Chr8 51996872 52002380 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02257 20 138 C2H2 Transcription Factor Family AT2G01650 31.496 5.43e-07 48.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02257 K15627 - gmx:100818386 391.349