Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02256 ATGGTGCGGCCAGCAGAGAAGGTGGCACGACAGAGTGTGTGGATCTCGAACATGGACTTGGTGGTGCCAAATTCCCACATGCCCTACGTGTACTTCTACAGGGCCAATGGCGCCTCCAACTTCTTTGATGCCAAAGTTCTGAAAAAGACTCTTAGCAAGGTGCTTGTCCCCTTCTACCCAATGGCCGGCCGCTTTTGTCACGACGAAGGCGGTCACGTCAAGATTGATTGTGACGGGCAAGGAGTATTCTTTGTCGAGGCCGACACTAGCAATGTCATTAACGATTTTGGTGACTTTACGCCCACACTTCAGCTCCGCCAGCTTATCCCCGCCATCAATGAATCACACGGAATCGAAACTTATCCCCTATTGGCGTTGCAAGTAACATATTTCAAATGTGGAGGGGTCTCACTAGGTTTTAGTCTACATCATCGCGTAGCAGATGGAATTTCTACTTTTCAATTTTTTAAAACATGGTCAGATGTGGCTCGTGGCAAAAATGTTTCCATCCCACCATTCATTGATCGGACACTGATCCGTGCCCAAGATCCACCTCGACCTGTTTTTGATCACATTGAATACAAGCCCCCACCAGCCATGAAGACTCACCCAAAACTAGGTTCAGACAGAGTAGAGGTCTCTATTTTTAAGCTGACTCATGACCAACTCAATTTACTAAAAGCTAAGTCCAAAGAAGAAGATAGCACAATCAACTACAACTCTTTTGAAATGTTGGCTGGTCACATGTGGAGAAGTGTATGCAAGGCAAGAGCACTTCCTGATGATCAAGAAACCAAATTTGACATTGCAATTAATGGACGATCAAGGTTGAAACCTCGCCTTCCACCAGGTTACTTTGGCAATGTGGTCTTCACTGCCGCACCTATAGCTATGGCAGGTGATCTCATGTCAAAACCAATATGGTATGCTGCAAGCTTAATCCGCAATGCCTTGTTACGAATGAATAATGAATATTTGAGATCAGCTCTTGACTATGTAGAGCTACAGCCTGATATTATACGTGGAGCACATACTTTCAGGTGTCCAAATCTTGGTGTCAGTAGCTGGGTTGGGCTTCCGATCCATGATTGTGACTTTGGTTGGGGAAGGCCTATATTCATGGGACCTGGTGGGATTCCATACGAGGGTCTATCTTTCATACTTCCAAGCTCAACAAATGATGGGAGCTTATCTGTGGCAATAGCTCTTCAGCCTGAGCATATGAAAGTGTTTAAGGAATTGTTGTATGACATTTGA 1257 0.4519 MVRPAEKVARQSVWISNMDLVVPNSHMPYVYFYRANGASNFFDAKVLKKTLSKVLVPFYPMAGRFCHDEGGHVKIDCDGQGVFFVEADTSNVINDFGDFTPTLQLRQLIPAINESHGIETYPLLALQVTYFKCGGVSLGFSLHHRVADGISTFQFFKTWSDVARGKNVSIPPFIDRTLIRAQDPPRPVFDHIEYKPPPAMKTHPKLGSDRVEVSIFKLTHDQLNLLKAKSKEEDSTINYNSFEMLAGHMWRSVCKARALPDDQETKFDIAINGRSRLKPRLPPGYFGNVVFTAAPIAMAGDLMSKPIWYAASLIRNALLRMNNEYLRSALDYVELQPDIIRGAHTFRCPNLGVSSWVGLPIHDCDFGWGRPIFMGPGGIPYEGLSFILPSSTNDGSLSVAIALQPEHMKVFKELLYDI* 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02256 418 FunFam Tryptamine hydroxycinnamoyl transferase 199 416 - -
Rops8g02256 418 SUPERFAMILY CoA-dependent acyltransferases 39 169 - -
Rops8g02256 418 PANTHER TRICHOTHECENE 3-O-ACETYLTRANSFERASE 1 415 - -
Rops8g02256 418 Pfam Transferase family 1 414 - -
Rops8g02256 418 Gene3D - 1 196 IPR023213 -
Rops8g02256 418 Gene3D - 197 418 IPR023213 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02256 Rops-Chr8 51959366 51962615 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02256 1 418 Monolignol Biosynthesis Gene Families AT5G48930 65.330 0.0 594
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02256 K13065 - gmx:100820075 656.751