Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02227 ATGAAAACAAAGCAAAGGAAGGAAGTTCAGAAACCTTGGAAATGCAAAGTAGGGGAAGCTGCATTTGGCAATTTAGAGGGTGCAGCAGAGTTTGTAGTTGGCAATTTGGAAGGTGCAGCAGGGTTTGTAGTTGGCAATCTGGAGGGTGCAGCAGGGTTTGTTGTTGGCAATTTAGAAGGTGCAGCAGGGTTTGTAGTTGGCAATGTGGAAGGTGCAGCTGGGTTTGTGGTAGGTAATTTAAAAGGTGCAGCAGGGTTTGTAGTTGGCAATATGGAAGGTGCAGCAGGGTTTATGGTTGGCAATTTGGAGGGAGCAGCTGTGGTTGGTGTTTTGCTAGAAGTGGGAGAAGTTGCTGCTGGTGGTTTCTTTGTGGTAGTAGGGGTTCTTTGCCACAACAGTGTCATAGGTGTGTGTGATAAGGTCATGGCACCAAATTCAGAGATGGCACCAAATTCAGAGGTGGCACCAAATTCAGAGAAAATCTGTGAAGGTGGTGCTGAGTCTCCAGCTAGTCTAGTTGGAACACAACCAACAGAAGCTGAACCCAAAAGTGAAAGAACCAAAGCCACAAGACACCCTCGATGGACAAGACAAGAAACACTTGTTTTGATAGAGGCTAAGAAAGTGGTGGAAAATGGAGAACAGGTTTGTCGATACAGATCAGCATCTGGGTTGGTTCAAACCGATCCAAAATGGGATTTGGTGTCATCATTCTGTCAGCAACATGGTGTCAAGAGAGGGGTTGTTCAGTGTAGAAAAAGATGGGGCAATCTTCTCAGTGATTTCAGGAAGATCAAGAAATGGGAGTCTAATATAAAGGAGGAGGGTGAATCGTTTTGGATTATGAGAAGTAATGTGAGGAAAGAAAAGAAATTGCCAGGGTTCTTTGATGCTGTGGTGTATAATGTATTGGATGGAGGGGTGTGCACTGCTGTTGCATTTCCATTGTCACTGATCAAAATGGCACCAAAAGTGGGGAATGGTGATCAAGTTGAAGGATTGGTGCCAGAGCAATGTAAGGAGGGTGAGGAGGATGTAGAGGAGGATGATGAGGCCATTGATGACAGTGAGAAAATGGGTTGGAGCACAGAGGAGGAAAACATTGAGACAAGCATGAATGGAAATAAGGATGATAATTATGAACCTGGTGATGACCCTCGCAAATTGCGTCCCGGTGAGATTGATCCTAATCCTGAGTCAAAGCCTACACGTCCTGGTGATGCTGCTTATTTAAGGTTGATATGGATGAGGATGAGAAGGAGATGCTTTCCGAAGCACGGGCTCGGCTAG 1290 0.4543 MKTKQRKEVQKPWKCKVGEAAFGNLEGAAEFVVGNLEGAAGFVVGNLEGAAGFVVGNLEGAAGFVVGNVEGAAGFVVGNLKGAAGFVVGNMEGAAGFMVGNLEGAAVVGVLLEVGEVAAGGFFVVVGVLCHNSVIGVCDKVMAPNSEMAPNSEVAPNSEKICEGGAESPASLVGTQPTEAEPKSERTKATRHPRWTRQETLVLIEAKKVVENGEQVCRYRSASGLVQTDPKWDLVSSFCQQHGVKRGVVQCRKRWGNLLSDFRKIKKWESNIKEEGESFWIMRSNVRKEKKLPGFFDAVVYNVLDGGVCTAVAFPLSLIKMAPKVGNGDQVEGLVPEQCKEGEEDVEEDDEAIDDSEKMGWSTEEENIETSMNGNKDDNYEPGDDPRKLRPGEIDPNPESKPTRPGDAAYLRLIWMRMRRRCFPKHGLG* 430
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02227 429 MobiDBLite consensus disorder prediction 341 355 - -
Rops8g02227 429 ProSiteProfiles Myb-like domain profile. 187 259 IPR001005 -
Rops8g02227 429 PANTHER TRIHELIX TRANSCRIPTION FACTOR ASR3 166 366 - -
Rops8g02227 429 Gene3D - 195 264 - -
Rops8g02227 429 MobiDBLite consensus disorder prediction 166 192 - -
Rops8g02227 429 MobiDBLite consensus disorder prediction 339 408 - -
Rops8g02227 429 Pfam Myb/SANT-like DNA-binding domain 193 279 IPR044822 -
Rops8g02227 429 MobiDBLite consensus disorder prediction 378 397 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02227 Rops-Chr8 51428735 51435075 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02227 375 405 MYB-Related Transcription Factor Family AT1G09770 77.419 3.38e-10 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02227 - - tpra:123916032 348.206