Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02221 ATGTGTAACAAGAATAGTCCTCCTCCAACTCCTTCACCTTCAGATAGTCAGAAAAACTCTATCATGAAGAAGACTCGAAAACAGAGTAAAGATTCTTCTTCTTCTTCCTCTTCGTCTTCCCTTAAACCACTCCGACGCAGAAACAGAACCAAAACCAGAAAACCCAAGTTTCTAAGTCTCCGACTTCAACTATCTCAAAATCAAAACCAGAAGAAAACCACCCATCAACAGAACCAACCTAACAACAAAACCCAACAACCCCAACTGAACCTCTTCCCCTTACACCCAGAAAACCTGGTGGAGGATAAAGACATGCATGAAGAGAACAACGTGGCTTTACTCTTCAGTTCCGACGGAGGCGCCACCCTCAACGGTCTCCTCGAGGACGAGTCCACAACCGCCGCCACGTCAGAGGAGGGGTCGTTCTCGGCGTTGACGTGTCCGGAGATGGACGGCGGAAACTGGCTGGTGAGGAAAGCGATGAGGAAGAGTAGTAAAGAGAGGGATGATGAGGGGAGTGAAGAGAGATGGGTGTGTTATTCTGAGGTTGTGGAGAAGAAGGAGATTATGGAAGAGGTGACTAGTTATTGTTGTGCCACCACCACAACCGCCGCCATGGAGGACCCTTTGTTTTGTGGTGGTGGTGGTGAGGGGAGAGGTGTTACGTCGTCGTTTCGGTTGTTGTCGTTGAAGCTAGATCACGAGGGGATATTGAATGCTTGGTCTGATAAAGGCTCTCTTTACGTAGCAGGAGAAGAGGCCCCACAGACTGTTCCTGATTTGCTCAATGGTGTCCTTTTTCATAATGCTCTTCCTCATAATGTTCCATGGGAGGGTTGGGGGAGTGATATTGTTGGGAACACATGGAAAGTTCCTGAAGATTGTGGAACTAACAAGACTAAAGTGAAAGAAGAAATGGGTTGGAAACTGGGGCAGAGAGAGGCAAGTGTGCTGAGATACAAGGAGAAGAGGCAAAACAGACTCTTCTCTAAGAGAATCCGTTATGAAGTTCGTAAGCTGAATGCTGAGAAGCGACCTAGGATGAAGGGACGATTTGTGAAGAGGGAATAA 1071 0.4743 MCNKNSPPPTPSPSDSQKNSIMKKTRKQSKDSSSSSSSSSLKPLRRRNRTKTRKPKFLSLRLQLSQNQNQKKTTHQQNQPNNKTQQPQLNLFPLHPENLVEDKDMHEENNVALLFSSDGGATLNGLLEDESTTAATSEEGSFSALTCPEMDGGNWLVRKAMRKSSKERDDEGSEERWVCYSEVVEKKEIMEEVTSYCCATTTTAAMEDPLFCGGGGEGRGVTSSFRLLSLKLDHEGILNAWSDKGSLYVAGEEAPQTVPDLLNGVLFHNALPHNVPWEGWGSDIVGNTWKVPEDCGTNKTKVKEEMGWKLGQREASVLRYKEKRQNRLFSKRIRYEVRKLNAEKRPRMKGRFVKRE* 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02221 356 MobiDBLite consensus disorder prediction 59 90 - -
Rops8g02221 356 MobiDBLite consensus disorder prediction 1 90 - -
Rops8g02221 356 Pfam CCT motif 313 355 IPR010402 GO:0005515
Rops8g02221 356 ProSiteProfiles CCT domain profile. 313 355 IPR010402 GO:0005515
Rops8g02221 356 PANTHER CCT MOTIF FAMILY PROTEIN, EXPRESSED 19 356 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02221 Rops-Chr8 51181584 51185975 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02221 228 355 C2C2-CO-like Transcription Factor Family AT1G73870 45.312 5.65e-23 97.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Rops8g02221 CCT 2.5e-18 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02221 - - gmx:100798231 368.237