Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02216 ATGGGTGAAGCTTTGGAATGTGAAGAACGACCTAAATACAGAGATATTAGACTATTTTTGCCATTACCGTGGAATCTGCAGATCCAAAAAGACCTTTATTACCTCTCACATCAATTCACACCACAAGTTAACTTGGAGTCAGTAGATGTAGTGTGCTTAGAGCCTGGTTGCATGAAACATTTCACCAATGCCCAGTGCCTAAGAGCCCATGTTAACTCATGCCATCAATATGAGACATGTGGCACTTGTGGGACTAAGCAACTGAAGAAGAATATTAAGAGCACACATGAATCTAGCAATTCATCAGAGACTTTAAATAAATCTAATCTTCACAAGCATGAGAAGGTTGTGCACTTCAAAGAAAAGCTTTTTGTGTGTGGGTTTGATGGTTGTGGCATGAGATTTGCTTACAAACATGTGAGAGATAACCATGATAAAACTGGGAAACATGTTTTTACCCTTGGGGATTTTGAAGAAGCTGATGAAGAATTCAAGTCAAGGCCCAGGGGAGGGAAGAAGAGAAAATATCCTACTGTTGAAATGTTAGTGAGGAAGAGAGTTACCCCACCAAGTCGAACTGGTTACTTATGCAGGATAGTGAGGAAGATGTGCATTGATCCAATGCGATATTGA 633 0.4013 MGEALECEERPKYRDIRLFLPLPWNLQIQKDLYYLSHQFTPQVNLESVDVVCLEPGCMKHFTNAQCLRAHVNSCHQYETCGTCGTKQLKKNIKSTHESSNSSETLNKSNLHKHEKVVHFKEKLFVCGFDGCGMRFAYKHVRDNHDKTGKHVFTLGDFEEADEEFKSRPRGGKKRKYPTVEMLVRKRVTPPSRTGYLCRIVRKMCIDPMRY* 211
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02216 210 SUPERFAMILY beta-beta-alpha zinc fingers 107 146 IPR036236 -
Rops8g02216 210 ProSitePatterns Zinc finger C2H2 type domain signature. 52 75 IPR013087 -
Rops8g02216 210 ProSitePatterns Zinc finger C2H2 type domain signature. 126 150 IPR013087 -
Rops8g02216 210 SMART c2h2final6 50 75 IPR013087 -
Rops8g02216 210 SMART c2h2final6 124 150 IPR013087 -
Rops8g02216 210 PANTHER ZINC FINGER PROTEIN 36 191 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02216 Rops-Chr8 51053674 51056157 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02216 20 153 C2H2 Transcription Factor Family AT1G72050 47.651 6.71e-36 127
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02216 K09191 - gmx:100801812 232.646