Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02203 ATGGTTGAGCTTTTGGCAATCATATTAACTTTCTTCTTAGGCCTGGCTTTTGCTTATCTTCTCAAATATCTTAACAAACAAGATGCTCCTCACCAATTGCCCCATGGAAGCATGGGGTGGCCCTTCTTTGGAGAGACTTTAAGCTTTCTCAAGCCCCATAGATCAAACTCCATGGGAAGCTTCTTACAAGAACGTTGTTCTAGGTATGGCAGAGTTTTCAAGTCGCATCTATTTGGTTCTCCCACCATAGTTTCCTGTGACTTTGAGCTCAACATGTTTATTCTTCAGAATGAAGGGAAATTATTCCCTGTTGATTACCCCAAGGTAATGCATAAAATCCTGGGGAAATTCTCTCTGATTCTTGTCACAGGAGACCTTCACAAGAGGATAAGAAGCACCGTTATCAATTTTGTCATCGCATCAAAGTCCGAATCCAGCTTCCTTAACTGTGTAGAAATGCTTGCACTCTCAAGGATTAACTCGTGGGGTCTGAACTGTAAACAAGTTGCTTTCTATAAAGAAGCTAAAAGGTTTTCCATCAATGTTATGCTGAAGCACCTTCTGAATATTAACCCTGATGAGCCACTGGCCTCCAAGATATTAGAAAACTTTGAGAACTATATCAAGGGCTTCGTTTCGTTGCCACTAAATATTCCAGGGACCGCATATTCCAACGCGTTGCAGGCTAGAATAAGACTCTCGTATATTATCAAAGATATCATAACGGAGAGACGTAAAGGTAATGTGGGGCCTGTGGAAGGAGGGTCCCTCTTGAATATGATTTTGTCAAAGGAGAACCTAAGTGCTGAAGAGAAGGTGAGCATTGTATTGGACCTCTTGTTTGGGGGCTATGAGACAACTGCAAAACTTTTGTCCTTGATTGTCTATTTCCTTGGGGGAGCCCCTAATGCTTTTGAGAGGTTAAAGGAGGAACACCAAGTGATAAGGAAAAGCAAAAAGGAGAGGGAACTACTGAACTTGGAAGACTATAAGCAAATGGAGTTCACTCAAGATGTAATAAATGAAGCTATGAGATGTGGGAATGTAGTCAAATTTCTGCACAGGAAAGCTGCTCAAGATATCAAATTCAAAGAGTTTGTGATACCCAAAGGGTGGAAGGTTCTACCTGTCTTGTCAGCTGGACATTTGGATCCCACCCTTTTTGAAAATCCTTTGGAGTTCAATCCCTTCCGCTGGAATGACAATTTGACAAGCAAGAAAGTGGCACCATTTGGTGGTGGTCCACGACTCTGTCCAGGGGCTGATCTAGCTAAAGTGGAGATAGCTTTCTTTCTTCATCATCTTGTCCTTAATTATAGTAAGTGTACACTACACGCTACAAACAATCCATACTATCAACCCCTCGTCGCTTTTCCCTTTCTTCTTTTCCACGACACATCTGACCTTATTGTATCGAAGCCCCTCTCTTCCCAAGGTAGATTCGAATTTTGA 1452 0.4194 MVELLAIILTFFLGLAFAYLLKYLNKQDAPHQLPHGSMGWPFFGETLSFLKPHRSNSMGSFLQERCSRYGRVFKSHLFGSPTIVSCDFELNMFILQNEGKLFPVDYPKVMHKILGKFSLILVTGDLHKRIRSTVINFVIASKSESSFLNCVEMLALSRINSWGLNCKQVAFYKEAKRFSINVMLKHLLNINPDEPLASKILENFENYIKGFVSLPLNIPGTAYSNALQARIRLSYIIKDIITERRKGNVGPVEGGSLLNMILSKENLSAEEKVSIVLDLLFGGYETTAKLLSLIVYFLGGAPNAFERLKEEHQVIRKSKKERELLNLEDYKQMEFTQDVINEAMRCGNVVKFLHRKAAQDIKFKEFVIPKGWKVLPVLSAGHLDPTLFENPLEFNPFRWNDNLTSKKVAPFGGGPRLCPGADLAKVEIAFFLHHLVLNYSKCTLHATNNPYYQPLVAFPFLLFHDTSDLIVSKPLSSQGRFEF* 484
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02203 483 CDD CYP90-like 65 440 - -
Rops8g02203 483 SUPERFAMILY Cytochrome P450 30 447 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 PANTHER CYTOCHROME P450 26 30 442 - -
Rops8g02203 483 Gene3D Cytochrome P450 24 455 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 PRINTS E-class P450 group I signature 66 85 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 PRINTS E-class P450 group I signature 271 288 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 PRINTS E-class P450 group I signature 408 418 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 PRINTS E-class P450 group I signature 377 401 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 PRINTS E-class P450 group I signature 418 441 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 PRINTS P450 superfamily signature 409 418 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 PRINTS P450 superfamily signature 282 299 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 PRINTS P450 superfamily signature 338 349 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 PRINTS P450 superfamily signature 418 429 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 Pfam Cytochrome P450 34 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02203 483 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 411 420 IPR017972 GO:0005506|GO:0016705
Rops8g02203 483 FunFam Cytochrome P450 724B1 28 465 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02203 Rops-Chr8 50775269 50783305 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02203 38 363 Cytochrome P450 AT5G14400 55.015 1.30e-132 385
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02203 K12639 - gmx:100791737 730.324