Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02193 ATGAAGCCATGGAAGAAGGTTTCTTGCTCTGCAATTACATTGACATTTCTCTTCTGTGATCAGCATATTAAGAATTTCTTGATGGAGTCACCTGTTGATGGAGTTGAGTCTTCATCAGAGGTTCAGAATTCAGCTTCTGGGGTGGATCACGATTCTCCTTCGACATCTGGGACTCCCCGGCCTTCCCAGCCTCCCTTAAGAGCATCAACAAATCATGGGGCTCCTTCCAATCATGGAATTAAGACCATCCACCATCAAAATAGCTATGTAGTTAATCAAAAGCATTCCTATCAGGAAGCTAACAATGTGGAGCATGAAGGATTGCCAAATATGGTGAAGCAGTATTATATCCCTAATGGCAAATCTGACCATGTGAGCCTTAATAAAACTGTTGAAAGTTGTTTAGGGGAGGATATCTCTTCAATGGAAACAAAATTGCACATTGATCAACCATTTGACAATTCCAAGAATTGTGATTCTAGTGGCAGATTAGAATCTGACAATTGCATATTAGGTTCATCAAAAGGAGTTGCTCATCAAACAAAGAGTAACTGTAACTCAGAGATTACTTTATGTCCAAGTGCTCAGAATAGTTTCCATCCTGCCACTGTCTATTCAGAAGCCAAGGAAAGTTTCACCAATACTGGAGTCAGTGAATGTGTTAGTACTGATAAATCAGTTGAAAGTGGAGATGTTACTAATTCCTGTGAATTTAACGAGAGCAGGAAGACTAGCATCTATAGAGAGAGTACTGGAAGTGATGTTAGTGATGAGAGCAGTACCAGTAGTTTGAGTAGTGCTTTGTCTAAACCCCACAAGGCAAATGATATACAATGGGAAGCAATTCAAGCCATCCGAGCTCGTGATGGGGGATTTGAAATGAGACATTTTAGATTGTTGAAGAAATTGGGATGTGGAGACATAGGAAGTGTATATCTAGCAGAGTTAAGTGGCACAAGGACTTGTTTTGCCATGAAAGTAATGAACAAAACAGAGCTGGCAAATCGCAAGAAGCTTCCGAGGGCTCAGACAGAGAGAGAGATCTTGCAGTCTCTAGATCATCCATTTCTACCCACATTATATACACACTTTGAGACAGAGACATTCTCCTGCTTGGTAATGGAGTTTTGCCCTGGTGGGGACCTGCATGCTCTCAGGCAAAGACAACCTGGGAAGTATTTTTCAGAGCATGCTGCCAGCTTGCTAGGTGGATGTCACTCCTCAATCCTTGGTCGTATCTAG 1242 0.4171 MKPWKKVSCSAITLTFLFCDQHIKNFLMESPVDGVESSSEVQNSASGVDHDSPSTSGTPRPSQPPLRASTNHGAPSNHGIKTIHHQNSYVVNQKHSYQEANNVEHEGLPNMVKQYYIPNGKSDHVSLNKTVESCLGEDISSMETKLHIDQPFDNSKNCDSSGRLESDNCILGSSKGVAHQTKSNCNSEITLCPSAQNSFHPATVYSEAKESFTNTGVSECVSTDKSVESGDVTNSCEFNESRKTSIYRESTGSDVSDESSTSSLSSALSKPHKANDIQWEAIQAIRARDGGFEMRHFRLLKKLGCGDIGSVYLAELSGTRTCFAMKVMNKTELANRKKLPRAQTEREILQSLDHPFLPTLYTHFETETFSCLVMEFCPGGDLHALRQRQPGKYFSEHAASLLGGCHSSILGRI* 414
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02193 413 Gene3D Phosphorylase Kinase; domain 1 291 403 - -
Rops8g02193 413 SUPERFAMILY Protein kinase-like (PK-like) 274 399 IPR011009 -
Rops8g02193 413 MobiDBLite consensus disorder prediction 248 269 - -
Rops8g02193 413 FunFam Serine/threonine-protein kinase D6PK-like 295 380 - -
Rops8g02193 413 PANTHER FLIPPASE KINASE 1-RELATED 119 399 - -
Rops8g02193 413 MobiDBLite consensus disorder prediction 35 80 - -
Rops8g02193 413 ProSiteProfiles Protein kinase domain profile. 297 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02193 413 SMART serkin_6 297 409 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02193 413 Pfam Protein kinase domain 298 399 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02193 Rops-Chr8 50641389 50647831 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02193 222 401 AGC Kinase Gene Family AT5G47750 72.778 7.02e-80 255
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK AGC_RSK-2 Rops8g02193 Pkinase 9.2e-16 CL0016