Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02186 ATGGATAATAATCATGGATCATCATCTTCTCCATACCAATATCCAAACCCTTATATGTACCCTCCAAATCCTCATCCTCCATACCCACCTCCAAGTCCAGCTCCTGATCCATATGCACATGTTCCTTATCCATATCCTTACCTTTCTTCACATTCCTTCAACTATTCCTATCCTCCACTTCCTAGATCACCCCCATCATCATCCCATTCGGATTATTCCTATCCCCCTCCTCCTCCATTACCCTCCATAGCCTTTCATAGTGCCTCTTTTAACCACCCTCCTCCTCCATTGGACTTTCCCAAGCCTCCACCATCTCATTCTCATTCTCCTTCTCTCTCTTATCCTTATCCCTACCATGCTCCTCCAGTGAGTCAGAGTTCTCCTAGACCTTACCTTTCACACCATGCTAGTTTACAACATGGATCATCTCATTACTATTATCATCAACAAAATGAGGCCTATTCATCTCATGAAGACAAGCCTGATTTCAATTTGCATGCCAATAGCTTCTCTAGTCCATACAGGCAAGAGACCACAGGAAGTGGAGTATCACAAACTAGTGATGATTCCAAGCCTTATAAGGGTTCTGCTTACCCAACTTTGGAAGATATTATGAGCGATGTTAAGTTGTCTGATAGCCTACCTACTGCTCCTGCATTACCTCCTGCACCTGCAGGGCAACCACTAATGCATTCCATTTCAGTTCCAAAGTTAGACCAGAAGAAAGAGGCTTTTTATGGATATTCTAATAACTCCTTCTCGGGTTGGGGATCCTCCTACCCTGATCGAGTGGATTCATTGAAACTTTCAGATTATTCTGGCTCATTTAATGAATCAATGCATAGTCGGAGTTTGCAGATTGTTCCAATACAGAACAAAGGGTCCTTGAGAGTTTTGCTCTTGCATGGAAATTTAGATATATGGGTTCATGAAGCCAAAAATCTTCCAAATATGGACATGTTCCACAAAACATTGGGGGATATGTTTGGTAAATTACCTGGTACTATGAGCAATAAAATCATTGGAACTGTGAATAGGAAGATCACTAGTGATCCTTATGTATCGATTTCAGTATCAAATGCTGTAATTGGGAGGACTTTTGTTATTAGTAACAGTGAAAATCCTATTTGGATGCAACATTTCTATGTTCCTGTTGCACATCATGCTGCTGAAGTGCACTTTGTTGTTAAAGACAGTGATATTGTGGGTTCACAACTCATTGGCATTGTGGCAATTCCGGTGGATCAAATATACTCAGGGGAAAAAGTTGAAGGAATTTACCCGATCTTGAATAATAATGGGAAGCCTTGTAAGCAAGGTGCTGTCCTGAGATTATCCATTCAGTACATCCCAATGGAGAAACTGATCATTTATCATCAAGGAGTTGGAGCAGGGTCTGATTACATTGGTGTTCCTGGCACTTATTTTCCTTTGAGGAAAGGTGGAACTGTTACTCTATATCAAGATGCTCATGTTCCAGATGATAGTCTCCCTAATGTGTTGCTTGACAATGGGATGTATTATGTGAATGGAAAGTGTTGGCAAGACATCTTTGAGGCCATAAGTCAAGCTCGGCGTTTGATTTATATTACGGGATGGTCAGTGTGGCACAAAGTTAGGCTGGTAAGAGATGCAGCTGGTTATGTATCAGATTGTACCTTGGGTGATCTTCTGAGGACAAAGTCACAGGAAGGAGTAAGAGTGCTTCTCCTTATTTGGGATGATCCTACATCAAGAAGCATTTTGGGTTATAAAACAGATGGTGTGATGGCAACTCATGATGAGGAAATTAGACGATTTTTCAAGCACTCTTCAGTGCATGTGCTGCTTTGTCCTCGCATTGCTGGAAAACGACACAGCTGGATCAAGCAAAAGGAAGTTGGAACAATATATACGCATCACCAGAAAACTGTAATTGTGGATAGTGATGCTGGAAATAACAGGAGAAAAATTGTAGCCTTTGTTGGTGGCCTTGATTTATGTGATGGGAGATATGATACTCCCCACCATCCTCTCTTTAGGACATTGCAGACAGCACATAAGGATGACTATCACAACCCTACTTTCACGGGTAATGTTGGTGGTTGTCCACGGGAGCCATGGCATGATTTACATTCTAAAATTGATGGTCCAGCAGCTTATGATGTTTTAACTAACTTTGAGGAGCGCTGGTTAAAAGCTTCAAAACCACACGGGATAAAGAAGTTGAAAATTTCATATGATGATGCTTTGCTGAGGCTGGAAAGAATTCCAGATGTTATTGGCATTAATGATACTTCTAGTGGTGGTGGTGATGATCCTGAAACTTGGCATGTTCAGATATTTCGTTCGATTGATTCAAATTCTGTTAAGAGATTTCCAAAGGATCCAAAAGAAGCAACTGGAAAGAACCTAGTATGTGGGAAGAATGTGCTGATTGACATGAGCATACACACAGCATATGTGAAGGCCATTCGTGCGGCACAACATTACATTTATATAGAGAATCAATATTTCATTGGGTCTTCTTACAATTGGAGTCAACATAAAGACCTTGGTGCTAATAATTTAATCCCAATGGAAATTGCTCTAAAGATTGCTGAAAAGATAAAAGCAAATGAGAGGTTTGCAGTGTATATTGTTATTCCAATGTGGCCAGAGGGTGTTCCAACAGGGGCTGCCACACAAAGGATTCTATTTTGGCAGAATAAAACAATGCAAATGATGTATGAGACAGTTTACAAGGCTTTGGTTGAGGCTGGTCTTGAAGCAGCATTCTCTCCACAAGACTATCTGAACTTTTTCTGTCTTGGCAATCGAGAGACCATAGACATGTATGATAATGTCAGTGTGTCAGGAAATCCTCCCCCAGCAAATAGTCCACAGGCAGCCAGTCGAAATAGCCGCCGTTTCATGATTTATGTTCATTCAAAAGGCATGATAATTGATGATGAATATGTGATATTGGGGTCTGCAAACATCAACCAACGCTCTATGGAAGGAACAAGGGACAGTGAGATTGCAATGGGAGCCTACCAACCTCATTATACCTGGGCAATGAAACATTCTTATCCACGCGGACAAATCCATGGATATAGGATGTCACTCTGGGCAGAACATACAGGAACAATTGATGAATGCTTCTTGCAACCTGAGAGCCTTGAATGTGTGCGAAAGATTAGAACAATGGGTGAAATGAACTGGAAACGATTTTCAGCAAATGAAGTAACAGAGATGAAAGGGCATCTAATAAAATACCCTGTAGAAGTTGATCGAAAGGGAAAAGTTAGACCCCTTCCTGGCCATGAAGAGTTCCCTGATGTGGGAGGAAGAATAGTTGGATCTTTTCTTGCCATGAAGGAGAATCTAACTATTTGA 3357 0.4111 MDNNHGSSSSPYQYPNPYMYPPNPHPPYPPPSPAPDPYAHVPYPYPYLSSHSFNYSYPPLPRSPPSSSHSDYSYPPPPPLPSIAFHSASFNHPPPPLDFPKPPPSHSHSPSLSYPYPYHAPPVSQSSPRPYLSHHASLQHGSSHYYYHQQNEAYSSHEDKPDFNLHANSFSSPYRQETTGSGVSQTSDDSKPYKGSAYPTLEDIMSDVKLSDSLPTAPALPPAPAGQPLMHSISVPKLDQKKEAFYGYSNNSFSGWGSSYPDRVDSLKLSDYSGSFNESMHSRSLQIVPIQNKGSLRVLLLHGNLDIWVHEAKNLPNMDMFHKTLGDMFGKLPGTMSNKIIGTVNRKITSDPYVSISVSNAVIGRTFVISNSENPIWMQHFYVPVAHHAAEVHFVVKDSDIVGSQLIGIVAIPVDQIYSGEKVEGIYPILNNNGKPCKQGAVLRLSIQYIPMEKLIIYHQGVGAGSDYIGVPGTYFPLRKGGTVTLYQDAHVPDDSLPNVLLDNGMYYVNGKCWQDIFEAISQARRLIYITGWSVWHKVRLVRDAAGYVSDCTLGDLLRTKSQEGVRVLLLIWDDPTSRSILGYKTDGVMATHDEEIRRFFKHSSVHVLLCPRIAGKRHSWIKQKEVGTIYTHHQKTVIVDSDAGNNRRKIVAFVGGLDLCDGRYDTPHHPLFRTLQTAHKDDYHNPTFTGNVGGCPREPWHDLHSKIDGPAAYDVLTNFEERWLKASKPHGIKKLKISYDDALLRLERIPDVIGINDTSSGGGDDPETWHVQIFRSIDSNSVKRFPKDPKEATGKNLVCGKNVLIDMSIHTAYVKAIRAAQHYIYIENQYFIGSSYNWSQHKDLGANNLIPMEIALKIAEKIKANERFAVYIVIPMWPEGVPTGAATQRILFWQNKTMQMMYETVYKALVEAGLEAAFSPQDYLNFFCLGNRETIDMYDNVSVSGNPPPANSPQAASRNSRRFMIYVHSKGMIIDDEYVILGSANINQRSMEGTRDSEIAMGAYQPHYTWAMKHSYPRGQIHGYRMSLWAEHTGTIDECFLQPESLECVRKIRTMGEMNWKRFSANEVTEMKGHLIKYPVEVDRKGKVRPLPGHEEFPDVGGRIVGSFLAMKENLTI* 1119
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02186 1118 MobiDBLite consensus disorder prediction 165 193 - -
Rops8g02186 1118 SUPERFAMILY Phospholipase D/nuclease 810 1050 - -
Rops8g02186 1118 MobiDBLite consensus disorder prediction 93 124 - -
Rops8g02186 1118 SMART pld_4 964 991 IPR001736 GO:0003824
Rops8g02186 1118 SMART pld_4 629 664 IPR001736 GO:0003824
Rops8g02186 1118 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 301 452 IPR035892 -
Rops8g02186 1118 MobiDBLite consensus disorder prediction 153 198 - -
Rops8g02186 1118 Gene3D Endonuclease Chain A 775 1023 - -
Rops8g02186 1118 Pfam Phospholipase D C terminal 1038 1108 IPR024632 -
Rops8g02186 1118 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 964 991 IPR001736 GO:0003824
Rops8g02186 1118 FunFam Phospholipase D 777 1010 - -
Rops8g02186 1118 FunFam Phospholipase D delta 298 445 - -
Rops8g02186 1118 MobiDBLite consensus disorder prediction 58 135 - -
Rops8g02186 1118 ProSiteProfiles Phospholipase D phosphodiesterase active site profile. 629 664 IPR001736 GO:0003824
Rops8g02186 1118 ProSiteProfiles C2 domain profile. 281 427 IPR000008 -
Rops8g02186 1118 FunFam Phospholipase D delta 504 743 - -
Rops8g02186 1118 Pfam Phospholipase D Active site motif 630 664 IPR001736 GO:0003824
Rops8g02186 1118 Pfam Phospholipase D Active site motif 965 991 IPR001736 GO:0003824
Rops8g02186 1118 SMART C2_3c 304 426 IPR000008 -
Rops8g02186 1118 Pfam C2 domain 303 429 IPR000008 -
Rops8g02186 1118 PANTHER PHOSPHOLIPASE D 293 1109 IPR015679 -
Rops8g02186 1118 Gene3D Endonuclease Chain A 506 743 - -
Rops8g02186 1118 SUPERFAMILY Phospholipase D/nuclease 498 729 - -
Rops8g02186 1118 Gene3D C2 domain 298 443 IPR035892 -
Rops8g02186 1118 CDD C2_plant_PLD 298 450 - -
Rops8g02186 1118 MobiDBLite consensus disorder prediction 58 83 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02186 Rops-Chr8 50517404 50527745 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02186 90 1118 Phospholipase D Gene Family (Wang group) AT2G42010 68.927 0.0 1454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02186 K01115 - gmx:100801286 1820.44