Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02185 ATGATCTTCAGGATACTCTTCCTATTCCTGGCTCTTATGATGACAAATTCAATAGCTCTCACGGCCCAGCAGACATACATAGTACACATGGACAAGACCAAAATCAGAGCCTCAATTCATTCTCAAGACAGCACAAAACCATGGTTTGAATCAATCATTGATTTCATTTCTGAAGCTTCAATGGAAGAAGAACAAGAAGAAGAAGAAGAAGAAGAAAAGATTTTAGCCCCTCAGCTTCTTTATGCCTATGAAACCAGCATGTTTGGTTTTGCGGCTACTCTTTCAGAGAAACAACTTAAATACTTGAACCAAATAGATGGTTTCCTTTTAGCCATACCTGATGAACTATTAACTCTCCATACAACATACACCCCACATTTTCTTGGCCTAAGAAATCGAAGAGGACTTTGGAGTGCTCCCAACTTGGCCTTAGATGTGATCATTGGGGTCATTGATACAGGGATATGGCCAGAACATATCAGTTTCCAAGACTCAGGTTTGTCACCAGTACCTCCTCATTGGAAAGGTATTTGTGAACAAGGCACCAAGTTCTCTGCCTCAAATTGTAACAAGAAGCTTATTGGTGCAAGAACCTATTACAAGGGGTATGAAAAATTTGTTGGAAAAAAAATCAATGAAACAAATGATTATCGTTCCCCTAGAGATTCTCAAGGGCATGGAACACACACTGCCTCAACTGCAGCTGGTGATATGGTGAAAAATGCCAACCTTTTTGGCCTTGCTAAAGGTTCAGCAAGTGGAATGAGGTATACCTCAAGAATTGCAGCTTATAAAGTTTGTTGGCGTGCTGGTTGTACTAATTCCGATCTATTAGCAGCCATGGATCAAGCAGTTTCTGATGGTGTTGATGTATTGTCACTCTCTGTAGGGGGTATTCCCAAACCTTTTTATAATGATAGTATTGCCATAGCCTCATTTGGGGCAATCCAAAATGGTGTTTTTGTTTCTTGCTCTGCAGGGAATTTAGGCCCTTTTGAATCAACAGTTGGAAATGGTGCACCATGGATCATGACAGTTGCTGCTAGCTACACTGACAGAACCTTTCCAACAAAAGTAAAACTTGGGAATGCAAAAGTTTTTGAAGGGTCATCTTTATATCAAGGCAAGAAAACAAACCAATTGCCTCTTGTCTATGGCAAATCAGCAGGTACAAAAAGTGAAGCACAGTATTGCACCAAAGGCTCACTTGATTCAAAGCTTGTGCATGGAAAAATAGTTGTTTGTGAAAAAGCAATAAATGGTAGAACTGAAAAGGGAGAGGAAGTGAAAATGGCTGGTGGGGCAGGAATGATACTACTTAATCCTGAAATTCAAGGAGAAGAGCTTATTGCTGATCCTCACATTTTACCAGCCACTTCATTAGGGGCTTCAGCAGGTAACATTATTAGAAGCTATATTAACACTACAACAAGACCAACAGCTTCAATTTCCTTTAGAGGGACAAGGTATGGTAACACTGCACCAATAATGGCAGCATTTTCTTCTAGAGGACCAAGTATAGTGGGACCAGATGTGATTAAGCCAGATGTTACTGCACCTGGTGTGAACATCTTAGCTGCTTGGCCATCAAATTCTAGCCCAAGCATGCTCATGAGTGATAAAAGAAGGGTACTATTTAACATACTCTCAGGTACCTCAATGTCTTGCCCTCATGTTAGTGGCTTAGCAGCATTGCTTAAATCTATGCATAAAGATTGGTCTCCTGCAGCTATCAAATCTGCTTTGATGACCACTGCTTACACATTTAACAATAAAGGAGCTCCAATTTCAGATATTGGTTCAAATAACTCACCATTTGCTAACCCCTTTACATTTGGTTCAGGCCATGTTAACCCTGAAAGTGCTTCTGATCCAGGGTTAGTCTATGATATCAGCACCAAAGACTATGTGAGTTACTTATGCGGCCTAAACTATACCTCTTCTCAGATTGCTTTATTCACAAAAGGTAACTTTAGATGTTCTAGAAAAGCAGTTTTTCAACCTGGTGACTTGAACTACCCTTCATTTGCTGTTATATTTGGAAGAAGTGCCATAAATGCTAGTGTGACATACAAGAGAGTTGTCACAAATGTTGGGAAACCACAAAGTGCTTATGCAGTTAAAGTGGAACAACCAAATGGTGTTTTAGTTACTGTTGAACCAAGGAAATTGAAGTTTGAAAAACTGGGTCAGAAATTAAGCTACAAGGTGACATTTGTTGCATTTGGAAAAACAAGAGTTGCTAGTAAATCATCATTTGGGTCATTGATTTGGGTGTCTGGCAAATATAAGGTTAGAAGTACTATAGCAGTAACCTGGCAATAA 2325 0.3966 MIFRILFLFLALMMTNSIALTAQQTYIVHMDKTKIRASIHSQDSTKPWFESIIDFISEASMEEEQEEEEEEEKILAPQLLYAYETSMFGFAATLSEKQLKYLNQIDGFLLAIPDELLTLHTTYTPHFLGLRNRRGLWSAPNLALDVIIGVIDTGIWPEHISFQDSGLSPVPPHWKGICEQGTKFSASNCNKKLIGARTYYKGYEKFVGKKINETNDYRSPRDSQGHGTHTASTAAGDMVKNANLFGLAKGSASGMRYTSRIAAYKVCWRAGCTNSDLLAAMDQAVSDGVDVLSLSVGGIPKPFYNDSIAIASFGAIQNGVFVSCSAGNLGPFESTVGNGAPWIMTVAASYTDRTFPTKVKLGNAKVFEGSSLYQGKKTNQLPLVYGKSAGTKSEAQYCTKGSLDSKLVHGKIVVCEKAINGRTEKGEEVKMAGGAGMILLNPEIQGEELIADPHILPATSLGASAGNIIRSYINTTTRPTASISFRGTRYGNTAPIMAAFSSRGPSIVGPDVIKPDVTAPGVNILAAWPSNSSPSMLMSDKRRVLFNILSGTSMSCPHVSGLAALLKSMHKDWSPAAIKSALMTTAYTFNNKGAPISDIGSNNSPFANPFTFGSGHVNPESASDPGLVYDISTKDYVSYLCGLNYTSSQIALFTKGNFRCSRKAVFQPGDLNYPSFAVIFGRSAINASVTYKRVVTNVGKPQSAYAVKVEQPNGVLVTVEPRKLKFEKLGQKLSYKVTFVAFGKTRVASKSSFGSLIWVSGKYKVRSTIAVTWQ* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02185 774 CDD PA_subtilisin_like 359 483 - -
Rops8g02185 774 FunFam Subtilisin-like protease SBT1.5 145 366 - -
Rops8g02185 774 Coils Coil 53 73 - -
Rops8g02185 774 Gene3D - 352 490 - -
Rops8g02185 774 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 26 771 IPR045051 -
Rops8g02185 774 FunFam Subtilisin-like protease SBT1.5 640 774 - -
Rops8g02185 774 SUPERFAMILY Subtilisin-like 119 627 IPR036852 GO:0004252|GO:0006508
Rops8g02185 774 Gene3D Peptidase S8/S53 domain 145 636 IPR036852 GO:0004252|GO:0006508
Rops8g02185 774 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 13 120 IPR037045 -
Rops8g02185 774 CDD Peptidases_S8_3 117 587 IPR034197 -
Rops8g02185 774 ProSitePatterns Serine proteases, subtilase family, serine active site. 551 561 IPR023828 -
Rops8g02185 774 PRINTS Subtilisin serine protease family (S8) signature 143 162 IPR015500 -
Rops8g02185 774 PRINTS Subtilisin serine protease family (S8) signature 222 235 IPR015500 -
Rops8g02185 774 PRINTS Subtilisin serine protease family (S8) signature 550 566 IPR015500 -
Rops8g02185 774 FunFam subtilisin-like protease SBT1.5 352 490 - -
Rops8g02185 774 Pfam PA domain 382 468 IPR003137 -
Rops8g02185 774 Pfam Fibronectin type-III domain 670 771 IPR041469 -
Rops8g02185 774 Pfam Subtilase family 145 591 IPR000209 GO:0006508|GO:0008236
Rops8g02185 774 Pfam Peptidase inhibitor I9 25 119 IPR010259 -
Rops8g02185 774 ProSiteProfiles Serine proteases, subtilase domain profile. 122 623 - -
Rops8g02185 774 Gene3D - 640 773 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02185 Rops-Chr8 50502801 50505125 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02185 23 774 Subtilisin-like Serine Gene Family AT1G01900 56.631 0.0 845
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02185 - - gmx:100790006 1266.52