Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02184 ATGTTAGTGTCTCAAAATCCCAACATGTCATTAGTAAATATGTTTTTACAGAAACTTACCAAATCCTTTTCTCTTCTTTGGCTGCTGACCTTGCTGAGCTTTGCTTTAGTTAATGGAGTTGAGCAAAAGAACTTTTACATTGTTTTCATGGGAGCTGATCCTGTGAGCAGAGACATTGCACTTGAGACCCATTTAAATGTTCTATCTGCTGTGAAGGGAAGCTATCTTGAAGCCAAAGAGTCCATGGTATATAGCTACACAAATAGCTTCAATGCATTTGCTGCAAAACTGTCTGAGGATGAAGCCAATAAGTTATCTGCCATGGATGAAGTACTCTTGGTATTTCAAAATCAATACCGCAAGCTACACACAACAAGATCATGGAATTTCATTGGCTTACCTCTGACTGCTAAGAGAAGATTGAGATTAGAGAGTGATATAGTTGTTGCTCTTTTAGATACAGGGATCACGCCTGAGTCTAAAAGCTTCAAGGACAATGGGTTTGGTCCTCCACCAACAAGATGGAAAGGAACTTGTGGCCACTATGCTAATTTCTCAGGCTGCAACAACAAGATCATAGGAGCCAAATACTTCAAGGCTGATGGAGACCTTGATCCATCTGACATATTATCTCCTATAGATGTTGATGGCCATGGCACTCATACTGCATCAACAGCTGCAGGCAATCTAGTCCTAAATGCAAGTCTCTTTGGATTGGCCAATGGCACTGCACGTGGCGCCGTGCCATCAGCTAGGTTGGCAATTTACAAAGTTTGTTGGTCACTAAGTGGATGTGCAGACATGGACATACTTGCTGCATTTGATGCTGCTATACATGATGGAGTGGATGTCATATCCATTTCCATTGGTGGAGGGAATCCTAATTATGTTCATGACTCTATATCAATTGGTGCATTTCATGCCATGAGGAAAGGTATAATCACAGTGGCCTCAGCTGGAAATGATGGTCCAAGTATGGGAACTGTAACAAATACTGCACCATGGATTGTAACAGTAGCAGCTAGTGGCATTGACAGGGCTTTCAGGAACACTGTACAGTTAGGAAGTGGAAAGAATATTTCTGGGGTAGGAGTGAGCTGTTTCAATCCAAAACAAAAACAGTACCCTCTTGTCAATGGCATTGATGCAGCTAAGGACTCTCAAAGCAAGGAAGAGGCTAAATTCTGCTATGAAGACTCCTTAGCACCAAAGAAGGTGAAGGGAAAGCTTGTTTACTGTGAATTCGGAACATGGGGCACTGAAGCTGTTGTGAAAGAAATTGGGGGCATTGGTGCTATAATAGAAAGTGAGCAATTTCCTGATGTTGCTCAAATTTTCATGGCTCCTGCTACCATTGTGAATGATAGCATAGGAGAAACTATTACCAATTACATAAAATCCACAAGATCACCATCAGCAGTGATATACAAGAGCAAAGAAATAAAAAGGCCAGCTCCATTTGCTGGTACATTCTCATCTAGAGGTCCAAATCCAGGATCCAAAAATATTCTCAAGCCTGACATTGCTGCTCCTGGCATTGACATCTTGGCATCTTATACTCTTAAGACGTCAATCACCGGTTTGAAAGGAGATACTCAATTTTCAGAATTTTCTTTATTGTCTGGGACTTCCATGGCATGTCCTCATGTTGCTGGAGTAGCAGCATATGTGAAGTCATTTCATCCAAATTGGACTCCTGCTGCAATCAGATCTGCTATTATCACCACAGCCAAACCTATGAGCAGGAGACTTAACAATGAGGCAGAATTTGCCTTTGGTTCTGGTCAGTTGAATCCAACAAGAGCTGTGAGTCCAGGTCTAGTCTATGATATGGATGACTTTGCTTATATCCAATTCTTATGCCATGAAGGTTACAATGGTTCTAGTTTATCAGTACTAGTTGGTTCTCCTGTAAATTGCTCCTCTTTGGTTCCTGGTCTTGGCCATGATGCTATCAACTACCCCACAATGCAACTTAGCTTGGAAAGCAAAAAGGACACAAAAATAGGAGTTTTTAGAAGAAGAGTGACCAATGTAGGTCCAGCTCCAACTATCTTCAATGCCACCATTAGATCACCAAAAGGAGTGGAAATAACAGTGAACCCTACTAGCCTCAATTTTTCTAGAACCCTTCAGAAGAAGAGCTTCAAAGTAGTTGTGAAAGTTAAATCTATTGCAAGCATGCAAATTCTATCAGGTTCACTTATATGGAGAAGTCCACGTTACATTGTGAGGAGTCCTATTGTTATCTATAGTCCATAA 2262 0.4116 MLVSQNPNMSLVNMFLQKLTKSFSLLWLLTLLSFALVNGVEQKNFYIVFMGADPVSRDIALETHLNVLSAVKGSYLEAKESMVYSYTNSFNAFAAKLSEDEANKLSAMDEVLLVFQNQYRKLHTTRSWNFIGLPLTAKRRLRLESDIVVALLDTGITPESKSFKDNGFGPPPTRWKGTCGHYANFSGCNNKIIGAKYFKADGDLDPSDILSPIDVDGHGTHTASTAAGNLVLNASLFGLANGTARGAVPSARLAIYKVCWSLSGCADMDILAAFDAAIHDGVDVISISIGGGNPNYVHDSISIGAFHAMRKGIITVASAGNDGPSMGTVTNTAPWIVTVAASGIDRAFRNTVQLGSGKNISGVGVSCFNPKQKQYPLVNGIDAAKDSQSKEEAKFCYEDSLAPKKVKGKLVYCEFGTWGTEAVVKEIGGIGAIIESEQFPDVAQIFMAPATIVNDSIGETITNYIKSTRSPSAVIYKSKEIKRPAPFAGTFSSRGPNPGSKNILKPDIAAPGIDILASYTLKTSITGLKGDTQFSEFSLLSGTSMACPHVAGVAAYVKSFHPNWTPAAIRSAIITTAKPMSRRLNNEAEFAFGSGQLNPTRAVSPGLVYDMDDFAYIQFLCHEGYNGSSLSVLVGSPVNCSSLVPGLGHDAINYPTMQLSLESKKDTKIGVFRRRVTNVGPAPTIFNATIRSPKGVEITVNPTSLNFSRTLQKKSFKVVVKVKSIASMQILSGSLIWRSPRYIVRSPIVIYSP* 754
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02184 753 CDD PA_subtilisin_like 351 475 - -
Rops8g02184 753 Pfam Subtilase family 145 595 IPR000209 GO:0006508|GO:0008236
Rops8g02184 753 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 35 123 IPR037045 -
Rops8g02184 753 ProSitePatterns Serine proteases, subtilase family, serine active site. 542 552 IPR023828 -
Rops8g02184 753 Gene3D - 620 752 - -
Rops8g02184 753 SUPERFAMILY Subtilisin-like 122 607 IPR036852 GO:0004252|GO:0006508
Rops8g02184 753 Gene3D Peptidase S8/S53 domain 146 613 IPR036852 GO:0004252|GO:0006508
Rops8g02184 753 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 62 749 IPR045051 -
Rops8g02184 753 Pfam Peptidase inhibitor I9 46 123 IPR010259 -
Rops8g02184 753 FunFam Subtilisin-like protease SBT5.3 36 123 - -
Rops8g02184 753 PRINTS Subtilisin serine protease family (S8) signature 214 227 IPR015500 -
Rops8g02184 753 PRINTS Subtilisin serine protease family (S8) signature 541 557 IPR015500 -
Rops8g02184 753 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Rops8g02184 753 Pfam Fibronectin type-III domain 652 750 IPR041469 -
Rops8g02184 753 CDD Peptidases_S8_3 121 577 IPR034197 -
Rops8g02184 753 Gene3D - 345 481 - -
Rops8g02184 753 FunFam Subtilisin-like protease SBT1.5 146 393 - -
Rops8g02184 753 ProSiteProfiles Serine proteases, subtilase domain profile. 127 603 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02184 Rops-Chr8 50493229 50497935 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02184 34 591 Subtilisin-like Serine Gene Family AT4G00230 64.695 0.0 748
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02184 - - gmx:100795950 1201.81