Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02176 ATGTCCTCACAAATCGCCACCAGATCACCGGTAATGGCGCCGTACTTCACGGTGTTTGCCCTCCTTGTCACCGCCGCCGCCGGAGCCGGATACCACAACCACACGGTGGGTGGCGCCGCCGGGTGGTTTTTCAACGCCACCACCAACACGCCGGCCACTAACTACTCTTCTTGGGCTGCAGATCAAACATTCGACCTTGGCGATTATCTCATTTTCAACACGAACTCAAACCAAACGGTGATTCTTACATACAACAAGACCTCTTATCTGAACTGCACCGCCGACGATTCAGACAACGGCACTTTCATATACGACTTCGGAAGCGGTCGTTTTGGTGAGGCGTTGACCATTCCCGTTGCGTTGACCATCGTGGGACCCAACTACTTCTTCTCCGACGCCAGCGACGGCGTCCAGTGCCGTCGCGGCTTGGCCTTCGAGATCGACGTCCAGCGCGGCCTCGGCTTGCCGCCGAGTCTTAACCAGCCGCCGCCACCACCGTACATTGAGCCTCCGGGTCCCGACACCGCTCAGTCTCCGCCGATCATGGTGGCGCAGTCCCCAATCGGCGGCGCGTGTGGGAGAATCGCTGACGTGCCCGTGGCGGTTCACGGCTTCGCGGCGGTGCTGCTGGTGTTTCAGTTTTGGTGA 648 0.5941 MSSQIATRSPVMAPYFTVFALLVTAAAGAGYHNHTVGGAAGWFFNATTNTPATNYSSWAADQTFDLGDYLIFNTNSNQTVILTYNKTSYLNCTADDSDNGTFIYDFGSGRFGEALTIPVALTIVGPNYFFSDASDGVQCRRGLAFEIDVQRGLGLPPSLNQPPPPPYIEPPGPDTAQSPPIMVAQSPIGGACGRIADVPVAVHGFAAVLLVFQFW* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02176 215 FunFam Early nodulin-like protein 18 31 152 - -
Rops8g02176 215 MobiDBLite consensus disorder prediction 155 178 - -
Rops8g02176 215 PANTHER BLUE COPPER PROTEIN 27 158 IPR039391 GO:0009055
Rops8g02176 215 Pfam Plastocyanin-like domain 47 142 IPR003245 GO:0009055
Rops8g02176 215 ProSiteProfiles Phytocyanin domain profile. 32 151 IPR003245 GO:0009055
Rops8g02176 215 MobiDBLite consensus disorder prediction 157 177 - -
Rops8g02176 215 Gene3D - 31 151 IPR008972 -
Rops8g02176 215 SUPERFAMILY Cupredoxins 32 149 IPR008972 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02176 Rops-Chr8 50342908 50344424 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02176 18 188 Phytocyanin Superfamily AT1G08500 35.227 3.66e-28 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02176 - - gmx:100783106 289.271