Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02171 ATGGATTACCAAACACTTGTACTACTGATTACCTTTGTATGTGCAAGTAGTGTCATCTTCATCCTTTTTTTATTCAATCAAACCCAAAATTCTATTAAGCTTCCACCAGGGCCAAGACCATTGCCTATAGTCGGAAACATGTTGGAACTTGGCAAAAATCCACATGAGGCACTCACCAAACTCTGTAAAATCTATGGACCTGTGATGACTCTGAAACTAGGAAGCATAACCACCATAGTCATCTCCTCTCCACAATTAGCCAAACTAGTGTTGCATGAGAATGGCCAAGTCTTCTCTAATAGGACAGTCCCACATGCAGCCTATGCACTTGACCATCACAGATACTCAATTGCATGGTTGCCCCCATCTGCTCATTGGAGGAACCTAAGAAGAGTTTGTGCTACAAAAGTATTCTCTCCACAATTTCTTGACTCCACACAAATCCTTCGACAACAAAAGGTACAAGAATTGTTGGATTATGTGAAGGAAAGATGTAACAAAGGTGAGGCTTTTGATATTGGTGAGGCTGCTTTTGCAACAGCCCTTAATATAATTTCAAACACTTTATTCTCTATGGATTTGTCTCACTTTACATCTACTGAAAAGTCTCAAGAGTTTCAGAAGATTATTTGGGTTCTCATGGAAGAATCTGGAAGGCCTAATGTTGCAGACTTCTTTCCAATTCTTCGTCCATTTGATCCACAACGTGTTCAAGCCAGGGCGAAAAATTATTTTGAGAAGCTGTTGAAGATTATTGATGAAATTATTGAAGAAAGAATGCGTTCAAGAGTTTCAAAAACTGATTCTAAGGTGTGCAATGATGTGTTAGATTCACTTCTTGACAATGTTGAAGAAACCAGTTCTCAGTTGAGCAGCAAAGAGATCTTACATCTATTTGTGGATTTATTTATTGCTGGGATTGACACAACATCAAAGACGGTTGAATGGATTATGGCAGAGCTACTGCGTAACCCAGATAAATTAGCAAAAGCAACAAAAGAGTTGTGTCAAACAATTGGCAAAGATGCGACACTTGAAGAATCACACATCTCAAACTTGTCTTTCTTACAAGCCGTGGTGAAGGAAACTCTTCGCTTGCACCCACCAGGTCCATTATTAATACCCCACAAATGTGATGAAATTGTAAAAATATCTAGCTTCGAAGTGCCAAAAAACGCACAAGTAATTGTCAATGTGTGGGCCATGGGACGAGACCCAACCATTTGGGAAAATCCAAATATGTTTGTGCCAGAAAGATTTTTGGAGCGTGACATTAATTATAAAGGACAAAATTTTGAGTTTATACCATTCGGAGCAGGCAAAAGGATATGCCCAGGATTGCCATTAGCTCACAGGACAGTGCATTTTATTGTGGGCTCCCTTTTGCACAACTTTGAATGGAAGCTAGCTGATGGGCTATTGCCAGAACAAATGAACATGACGGAGCAATTCGGGTTAAGCTTGAAAAGGGTTGAACCACTTCGAGTTCAAGCTATTTCAATGAAGCATGGTTAA 1515 0.396 MDYQTLVLLITFVCASSVIFILFLFNQTQNSIKLPPGPRPLPIVGNMLELGKNPHEALTKLCKIYGPVMTLKLGSITTIVISSPQLAKLVLHENGQVFSNRTVPHAAYALDHHRYSIAWLPPSAHWRNLRRVCATKVFSPQFLDSTQILRQQKVQELLDYVKERCNKGEAFDIGEAAFATALNIISNTLFSMDLSHFTSTEKSQEFQKIIWVLMEESGRPNVADFFPILRPFDPQRVQARAKNYFEKLLKIIDEIIEERMRSRVSKTDSKVCNDVLDSLLDNVEETSSQLSSKEILHLFVDLFIAGIDTTSKTVEWIMAELLRNPDKLAKATKELCQTIGKDATLEESHISNLSFLQAVVKETLRLHPPGPLLIPHKCDEIVKISSFEVPKNAQVIVNVWAMGRDPTIWENPNMFVPERFLERDINYKGQNFEFIPFGAGKRICPGLPLAHRTVHFIVGSLLHNFEWKLADGLLPEQMNMTEQFGLSLKRVEPLRVQAISMKHG* 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02171 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 14 499 - -
Rops8g02171 504 CDD CYP76-like 63 496 - -
Rops8g02171 504 FunFam Cytochrome P450 76C4 26 497 - -
Rops8g02171 504 PRINTS P450 superfamily signature 444 455 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS P450 superfamily signature 358 369 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS P450 superfamily signature 305 322 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS P450 superfamily signature 435 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 Gene3D Cytochrome P450 22 502 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 SUPERFAMILY Cytochrome P450 35 498 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 437 446 IPR017972 GO:0005506|GO:0016705
Rops8g02171 504 Pfam Cytochrome P450 35 486 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS E-class P450 group I signature 180 198 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS E-class P450 group I signature 86 107 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS E-class P450 group I signature 357 375 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS E-class P450 group I signature 294 311 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS E-class P450 group I signature 398 422 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS E-class P450 group I signature 62 81 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS E-class P450 group I signature 444 467 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS E-class P450 group I signature 314 340 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02171 504 PRINTS E-class P450 group I signature 434 444 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02171 Rops-Chr8 50225301 50227930 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02171 4 494 Cytochrome P450 AT2G45550 44.930 6.96e-157 454
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02171 - - gmx:100809461 734.561