Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02170 ATGGACAACCAAACACTGCTACTACTGATTACCTTTGTATGTGCAAGCATTCTCATCTTCATCCTTATATCATTCAACCAAACCCAAAAATCTACTAAGCTTCTTCCACCAGGGCCACGCCCATTTCCTATCATAGGAAACATATTGGAACTTGGCAACAATCCACACAAGGTACTCACCAAACTCTCTAAAATTTATGGACCTGTGATGACTCTCAAACTAGGCAGCAAAACCACCATAGTCATTTCCTCTCCACAATTAGCAAAACAAGTGTTACATGAGAATGGCCAAGCCTTCTCTAATAGGACAGTCCCACATGCAGTTCATGTATTTGGTCATCACAAATACTCAATAGTGTGGTTGCCCCCTTCAGCTCATTGGAGGAACCTCAGAAGAATTTGTGCTACAAAAGTATTCTCCACACAAATGCTTGATTCCACAAAAATCCTTCGTCAAAAAAAGGTGCAAGAATTGTTGGATTATGTGAATGAAAGATGCAACAAAGGTGAGGTTCTTGAAATTGGTGATGCTGTTTTTACAACAGTCCTTAATTCAATTTCAAACACTTTATTCTCTATGGATTTGTCTCACTCTGCATCTGATGAAAAGTCTCAAGAGTTTAAGAACATTATTTGGGGTATGATGGAAGAAGCTGGAAGGCCTAATGTTGCAGACTTCTTTCCCATTCTTCGTCCATTTGACCCACAACGTGTTCAGGCCAGGATAAAAAATTATTTTAAGAAGCTTCATCAGATTATTGATGGAATTGTTGAAGAAAGAATGCATTCAAGAGTTTCAAAAACTGATTCCGAGGTGTGCAATGATGTTTTAGATTCACTTCTTAACAATGTTGAAGAAACCAGTTCTCAGTTGAGCCGCAATGAGATTTTACCTGTATTTCTGGATTTATTTGTTGCTGGGAGTGACACAACATCAAACACAGTTGAATGGACTATGGCAGAGCTACTGCGTAACCCAAAAAAATTAGCAAAAGCAAGAGAAGAGTTGTGTCAAGCAATTGGCAAAGATGCAACACTTGAAGAATCACACATCTCAAAGTTGTCTTTCTTACAAGCAGTTGTAAAGGAAACTCTTCGTTTGCACCCACCAGCTCCATTTTTAGTACCCCACAAGTGTGATGAAATTGCAAACATATCTGGCTTCAAAGTGCCAAAAAATGCTCAAGTCCTAGTCAATGTGTGGGCCATGGGACGAGACCCAACCATTTGGGAAAATCCAAATATGTTCGAGCCTGAAAGATTTTTGGAGAGTGAGATTAATTATAAAGGTCATAATTTTGAGCTGATACCATTTGGGGCAGGCAAAAGGATATGCCCAGGATTGCCATTAGCTCACAGGACACTGCATTTTATTGTGGGCTCCCTTTTGCACAACTTTGAATGGAAGCTAGCTGATGGGCTAATGCTGGAACACATGAACATGCAGGAGCAATTCGGGTTAACGTTAAAAAGGGCCCAACCTCTTCGTGTTCAAGCTATTTCAATCAAGCATGGTTAG 1518 0.3992 MDNQTLLLLITFVCASILIFILISFNQTQKSTKLLPPGPRPFPIIGNILELGNNPHKVLTKLSKIYGPVMTLKLGSKTTIVISSPQLAKQVLHENGQAFSNRTVPHAVHVFGHHKYSIVWLPPSAHWRNLRRICATKVFSTQMLDSTKILRQKKVQELLDYVNERCNKGEVLEIGDAVFTTVLNSISNTLFSMDLSHSASDEKSQEFKNIIWGMMEEAGRPNVADFFPILRPFDPQRVQARIKNYFKKLHQIIDGIVEERMHSRVSKTDSEVCNDVLDSLLNNVEETSSQLSRNEILPVFLDLFVAGSDTTSNTVEWTMAELLRNPKKLAKAREELCQAIGKDATLEESHISKLSFLQAVVKETLRLHPPAPFLVPHKCDEIANISGFKVPKNAQVLVNVWAMGRDPTIWENPNMFEPERFLESEINYKGHNFELIPFGAGKRICPGLPLAHRTLHFIVGSLLHNFEWKLADGLMLEHMNMQEQFGLTLKRAQPLRVQAISIKHG* 506
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02170 505 PRINTS P450 superfamily signature 436 445 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS P450 superfamily signature 359 370 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS P450 superfamily signature 306 323 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS P450 superfamily signature 445 456 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 CDD CYP76-like 63 497 - -
Rops8g02170 505 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 438 447 IPR017972 GO:0005506|GO:0016705
Rops8g02170 505 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 15 500 - -
Rops8g02170 505 Pfam Cytochrome P450 36 492 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS E-class P450 group I signature 63 82 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS E-class P450 group I signature 358 376 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS E-class P450 group I signature 445 468 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS E-class P450 group I signature 435 445 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS E-class P450 group I signature 87 108 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS E-class P450 group I signature 315 341 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS E-class P450 group I signature 399 423 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 PRINTS E-class P450 group I signature 295 312 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 Gene3D Cytochrome P450 21 504 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02170 505 FunFam Cytochrome P450 76C4 27 498 - -
Rops8g02170 505 SUPERFAMILY Cytochrome P450 36 499 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02170 Rops-Chr8 50203305 50212114 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02170 1 503 Cytochrome P450 AT2G45550 45.652 3.54e-165 476
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02170 - - gmx:100810526 751.895