Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02166 ATGGCCGCTAATCTTCCTGCATCAGCAAGGTCAGCCACGGCAACGTCGTTTCAGGAGAAACGACACCGTTCCATCTTCGAAGTTCCACAAAACTTCTTCGACTCTTGTCGTCTTCTCCCTTCTCCTCACTCATCCGTTTCCGAGCACCACAACAACGCAGCCATCGAAACCCCTGAACCACCCTCGAACGACGTCGTTGTAGACGATGATATTCAAAACGCCGTCGTTTCGGCTCCTAGGTGGACTTGTAATACCTGCAAGGCTCAATTCGATTCTCTTCAAGACCAGCGTTCCCATTTCAAATCCGACATTCATCGATTCAATGTGAAGCTGACACTTGCTGGAAAGAATATTGTGAAAGAAGAAGATTTTGAGGTGTTGACATCTGAATTTGTCAAAGACTATGATGTGTCAAGTATATCTGGATCAGAAAGTGATGATGACAGTGATATTGAGTCTCAAAGTCAAAATGAAGTGCGTGACAAATCAAGTGGAAGCTTCAAACAAAAGCTATTTATCTCTCTTCAGACGGGGCAGAGAGTTTCTGTCTGGAAGAGCTTGATTATGAATGTGACTGAAAATGTATTGTACGAGAATGAAAAAGCAGAGAATGAAGTAGTTGAGAGGTTGAAATCTCTGACTATTGAGCCCAGGGATAACACCCATTTGAGGATCGTTCTGCTTGTGTCTGGTGGGCACTTTGCAGGTTGTGTCTTTGATGGTGATGCAGTTGTGGCTCACAAGACATTTCACAGATATGTTGTAAGGGCCAAGGCAGGGAAAAAACAGTCGTCTAAAGATGCTTCTGGCAGGGCTGCACATTCTGCTGGGGCTTCACTTCGTCGTTATAATGAACTTGCATTAAAGAAGGAAGTTCATGAACTGCTTTCTGCTTGGAGACCTTATTTTGACGCTTCTAAGTGCATTTTTATACACGCACCTTCAAGTAGTCGTCAACTGCTTTATGATGGAGAAAGGCCATGTTTTACCAATCCGCAGGGTGCCATTAGAAATATTGCTCTGATCGTTCGGAGGCCTACTTTGAGGGAAGCGAAGCGTGTATATAGCCAGTTGACCCAAGTATCCTATGAAGCAGAGAAGGAAATTTTACAAAGCAACCAAGAGGACTTGGGACCAGTTCACATTGCTGAAAGAAACGGCATCCCACCCTCCTGCAAAGGGGACATGGCTGGGCTGGATGACAAGGATAAAGCTGAAGCTTGTTCAAGTAAACAAAATGAAGAAATTCTTATATCAAGTAATGGAGAAAGTGAGAATGAGCAACCTGCTAAATCAACTCCTTTACATCAAGCAGCACAATCTGGTGACTCGCAAAAGGTTATGGAACTCCTGGAACAGGGGTTGGATCCTTGCATCAAAGATGAAAGGGGACGGACCCCATATATGTTGGCACATGACAAGGAACTCAGGGATACTTTCAGAAGGTTTATGGCATCAAATCTTGACAAATGGGATTGGCATGCTGCAAAAGTGCCTAGTGCATTGACCAAAGAAATGGAAGAATCACAAGCTGCTAAGCAGGCAGAAAAAGATGCTAAGAGAAAAGCTAGAGCAAAAGAATTAAAGAAATTGCGCAAAGCAAAAGAAAAGAAGGCTCAGGCTGAAGCTTCCATGGCTACGAATGATTCCAAAACTGTAGAAAAGCAATTGACTGCTCCAGCATCTACCAAGGGACAATCTCAACCAAAAAGTGGTGTAAAATTATCAAAAGAGGAGGAAATAGCTGCAGAAAGAGAAAAGAGAGCAGCTGCTGCAGAGAGAAGAATAGCTGCCCTCAAAATTCAACAAGTTAATAGTGCAACCGCTGGACCTAGCATTTCAGAGCCTAAAAGTGGATTAGCTGGTGACATTTACTGTTCCTGTTGTAATTCATCACTTGCTGGTAAGGTTCCCTTCCACCGGTATAATTACAAATACTGCAGCACATCATGCATGCACGTACACAGGGAGATCCTGGAAGATGGATGA 1989 0.4369 MAANLPASARSATATSFQEKRHRSIFEVPQNFFDSCRLLPSPHSSVSEHHNNAAIETPEPPSNDVVVDDDIQNAVVSAPRWTCNTCKAQFDSLQDQRSHFKSDIHRFNVKLTLAGKNIVKEEDFEVLTSEFVKDYDVSSISGSESDDDSDIESQSQNEVRDKSSGSFKQKLFISLQTGQRVSVWKSLIMNVTENVLYENEKAENEVVERLKSLTIEPRDNTHLRIVLLVSGGHFAGCVFDGDAVVAHKTFHRYVVRAKAGKKQSSKDASGRAAHSAGASLRRYNELALKKEVHELLSAWRPYFDASKCIFIHAPSSSRQLLYDGERPCFTNPQGAIRNIALIVRRPTLREAKRVYSQLTQVSYEAEKEILQSNQEDLGPVHIAERNGIPPSCKGDMAGLDDKDKAEACSSKQNEEILISSNGESENEQPAKSTPLHQAAQSGDSQKVMELLEQGLDPCIKDERGRTPYMLAHDKELRDTFRRFMASNLDKWDWHAAKVPSALTKEMEESQAAKQAEKDAKRKARAKELKKLRKAKEKKAQAEASMATNDSKTVEKQLTAPASTKGQSQPKSGVKLSKEEEIAAEREKRAAAAERRIAALKIQQVNSATAGPSISEPKSGLAGDIYCSCCNSSLAGKVPFHRYNYKYCSTSCMHVHREILEDG* 663
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02166 662 Coils Coil 575 602 - -
Rops8g02166 662 MobiDBLite consensus disorder prediction 504 580 - -
Rops8g02166 662 ProSiteProfiles Ankyrin repeat profile. 430 462 IPR002110 GO:0005515
Rops8g02166 662 MobiDBLite consensus disorder prediction 396 410 - -
Rops8g02166 662 ProSiteProfiles Ankyrin repeat region circular profile. 430 462 - -
Rops8g02166 662 Gene3D - 395 553 IPR036770 -
Rops8g02166 662 Pfam Bacteroidetes VLRF1 release factor 225 363 IPR041175 -
Rops8g02166 662 PANTHER ANKYRIN REPEAT AND ZINC FINGER DOMAIN-CONTAINING PROTEIN 1 18 661 IPR047139 -
Rops8g02166 662 MobiDBLite consensus disorder prediction 543 572 - -
Rops8g02166 662 SUPERFAMILY beta-beta-alpha zinc fingers 79 114 IPR036236 -
Rops8g02166 662 Coils Coil 506 544 - -
Rops8g02166 662 MobiDBLite consensus disorder prediction 139 162 - -
Rops8g02166 662 MobiDBLite consensus disorder prediction 375 444 - -
Rops8g02166 662 MobiDBLite consensus disorder prediction 509 523 - -
Rops8g02166 662 SUPERFAMILY Ankyrin repeat 415 487 IPR036770 -
Rops8g02166 662 MobiDBLite consensus disorder prediction 412 444 - -
Rops8g02166 662 MobiDBLite consensus disorder prediction 44 58 - -
Rops8g02166 662 Pfam Vms1-associating treble clef domain 625 657 IPR041540 -
Rops8g02166 662 MobiDBLite consensus disorder prediction 44 63 - -
Rops8g02166 662 ProSitePatterns Zinc finger C2H2 type domain signature. 83 105 IPR013087 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02166 20 535 C2H2 Transcription Factor Family AT1G01930 54.820 0.0 555
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02166 K26089 - gmx:100527709 956.436