Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02160 ATGGCTTCCAATCTTCCTCGAAATGGCGCCCAAAGAGGAAGCGCCAAGTTCAAACCTCGTCTCCGTCCTTCCTCTCCCTCGCCGGGATCAGCCATTCGCCGCTCAAACCCCGCCGCACGAAACGGCGACGCCGTGCCTGGAAGAGTTCGAGTGGCTGTAAGGTTGAGACCTCAAAATGCTGAAGAAATGATGGTAGATGCTGATTTTGCTGACTGTGTCGAATTACAACCAGAGCTTAAAAGATTGAAACTTCGTAGAAACAATTGGGATTCAGACACTTATGAATTTGATGAGGTGTTTACCGAATTTGCATCACAGAAACGTGTCTATGAAGTTGTCGCTAAGCCAGTTGTGGAGAGTGTTCTTGATGGTTATAATGGGACTGTGATGGCTTATGGCCAAACTGGAACGGGGAAAACTTTTACTCTTGGACGACTGGGAGATGGAGACACCTCTGATCGTGGTATCATGGTTCGTTCCATGGAAGATCTTTTTGCTGACTTATCTCCAGATACTGATTCTGTCACTGTCTCATATCTTCAGCTTTACATGGAGGCTCTCCAGGACTTGCTTAATCCAGCTAATGATAATATTCCTATAGTGGAAGATCCAAGAACCGGTGATGTATCCTTGCCTGGGGCAACTCTTGTAGAAATCAGGGACCAACAGAGTTTTTTGGAGTTGTTAAGAGTAGGGGAAGCTAATCGAGTTGCTGCTCACACAAAATTGAATACTGAATCTTCTCGTAGTCACGCTATTCTGATGGTACATATTAGGAGGTCTGTCATGGAAAGTGAAGATATTGTATCTAGTCAAAATGGTGACGCCTCCCACTTGACTAAACCTTCGAAACCACTTGTTCGGAAGAGCAAGTTGGTTGTGGTAGACTTGGCAGGTTCAGAGCGTGTCCATAAGTCAGGAAGTGAAGGGCACATGCTAGAGGAAGCTAAATCTATCAATCTTTCACTTAGTTCACTGGGAAAATGTATTAATGCTCTAGCAGAGAACAATGCTCATGTTCCATTTCGTGATTCAAAGCTTACCAGGATGCTCCGAGATTCTTTTGGTGGCACAGCTAGGACTTCATTGATTGTGACTATTGGCCCATCTCCACGTCATCGAGGAGAGACTTCTAGTACCATATTGTTTGGCCAAAGAGCTATGAAAGTTGAGAATATGCTGAAAATAAAGGAAGAGTTTGATTATAAAAGCTTGTCTCGAAAGCTTGAGGTACAATTAGATAAGCTTATTGCAGAAAATGAAAGGCAGCAGAAAGCTTTTGAGGATGAAATTGAAAAAATTAATTTGGAGGCACAATATCGTACTGCTGAGGTTGAGAGAAACTTTGCAGATGCATTAGAGAAAGAGAGATTGAAATGCCAGATGGAGTACATGGAATTGGTAAAGGAGCTGGAGCAGAAGTTGGTGTTAAATCAAGAAAGACATGACTGCAATAGTTTTGTGGCTGCTCATGGAGAGGCACAGGGGCCAGCATTATCTTCTGCAGATGAAGTTGCCGAGGTGAAAATGCTTCTTGAAACTGAAAGCAAGCGGAGAAAGGCAGCTGAAGAAGAGGTCGAATATCTACAAAATCAGCTGGGGAAATATACACAAACAGAGGCAGGAGGGGATTTGGAGATTATAAAGCTGCGCAACATCCTGGAGGATGAAGCTAATCAGAAAAAGAAACTTGAAGAAGAAATAATAATATTAAGAAGTCAATTATTGCAATCGAACTTTGAAGCTGACCAGATGAGAAGGTGTTTGGAAAATGGAAGCTCTGGGAGCACATTTGCTGCCATGGATTCCTCCATGAATCAGGTTAAGCAGTCCCAATTCAAAGACACTGGGAATGGTCAGAAGTCATCTGTTGCTACACTCTTTGAGCAAGTTGGATTGCAAAAGATTTTGTCATTGCTGGAGTCAGATGATGCCAATGTACGAGTTCATGCTGTAAAAGTGGTCGCCAACCTAGCAGCTGAAGAGGCTAATCAAAAGAGAATTGTTGAAGCTGGTGGTCTTACTTCCTTGCTGATGCTACTTCGAAGATATGAGGATGAAACTGTTCGCAGAGTAGCTGCTGGGGCAATAGCCAATCTTGCTATGAATGAAGCGAATCAAGAACTTATAATGGCTGAAGGAGGAATTACTCTGTTGTCAATGACTGCATCTGATGCTGAAGATCCACAAACTCTTCGAATGGTTGCTGGGGCAATTGCTAACCTATGTGGAAATGATAAAATATTGATGACTCTAAGATCTCAGGGAGGTATCAAGGCTTTACTGGGAATTGTAAGATGTGGGCATCCAGATGTTCTTTCCCAAGTTGCACGAGGAATTGCTAACTTTGCCAAATGCGAGTCTCGAGCTTCTAATCAAGGGATAAGGAGTGGCAGATCTATTTTGATAGAAGATGGTGCACTTCCGTGGATAGTACAGAATGCTAATAATGAATCTGCACCAATCAGGCGTCACATTGAGCTTGCACTATGCCACTTGGCACAGCATGAAGTGAATGCAAAAGACATGATTAGTGGAGGTGCTCTTTGGGAACTTGTCAGGATTTCACGGGATTGTTCACGAGAGGACATAAGGAGTCTTGCTCGTAGGACCCTCAGTACTATCTCGACATTCAAGTCTGAATTACGGCGATTGCGTATAGATTATTGA 2670 0.4326 MASNLPRNGAQRGSAKFKPRLRPSSPSPGSAIRRSNPAARNGDAVPGRVRVAVRLRPQNAEEMMVDADFADCVELQPELKRLKLRRNNWDSDTYEFDEVFTEFASQKRVYEVVAKPVVESVLDGYNGTVMAYGQTGTGKTFTLGRLGDGDTSDRGIMVRSMEDLFADLSPDTDSVTVSYLQLYMEALQDLLNPANDNIPIVEDPRTGDVSLPGATLVEIRDQQSFLELLRVGEANRVAAHTKLNTESSRSHAILMVHIRRSVMESEDIVSSQNGDASHLTKPSKPLVRKSKLVVVDLAGSERVHKSGSEGHMLEEAKSINLSLSSLGKCINALAENNAHVPFRDSKLTRMLRDSFGGTARTSLIVTIGPSPRHRGETSSTILFGQRAMKVENMLKIKEEFDYKSLSRKLEVQLDKLIAENERQQKAFEDEIEKINLEAQYRTAEVERNFADALEKERLKCQMEYMELVKELEQKLVLNQERHDCNSFVAAHGEAQGPALSSADEVAEVKMLLETESKRRKAAEEEVEYLQNQLGKYTQTEAGGDLEIIKLRNILEDEANQKKKLEEEIIILRSQLLQSNFEADQMRRCLENGSSGSTFAAMDSSMNQVKQSQFKDTGNGQKSSVATLFEQVGLQKILSLLESDDANVRVHAVKVVANLAAEEANQKRIVEAGGLTSLLMLLRRYEDETVRRVAAGAIANLAMNEANQELIMAEGGITLLSMTASDAEDPQTLRMVAGAIANLCGNDKILMTLRSQGGIKALLGIVRCGHPDVLSQVARGIANFAKCESRASNQGIRSGRSILIEDGALPWIVQNANNESAPIRRHIELALCHLAQHEVNAKDMISGGALWELVRISRDCSREDIRSLARRTLSTISTFKSELRRLRIDY* 890
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02160 889 Coils Coil 547 574 - -
Rops8g02160 889 FunFam Kinesin-like protein 601 877 - -
Rops8g02160 889 Gene3D - 616 721 IPR011989 -
Rops8g02160 889 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 631 673 IPR000225 GO:0005515
Rops8g02160 889 Pfam Kinesin motor domain 54 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02160 889 Gene3D Kinesin motor domain 41 421 IPR036961 -
Rops8g02160 889 Coils Coil 450 470 - -
Rops8g02160 889 ProSiteProfiles Armadillo/plakoglobin ARM repeat profile. 672 715 IPR000225 GO:0005515
Rops8g02160 889 Coils Coil 505 539 - -
Rops8g02160 889 SMART kinesin_4 46 398 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02160 889 CDD KISc 48 388 - -
Rops8g02160 889 PRINTS Kinesin heavy chain signature 124 145 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02160 889 PRINTS Kinesin heavy chain signature 291 309 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02160 889 PRINTS Kinesin heavy chain signature 340 361 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02160 889 PANTHER CENTROMERE PROTEIN E 48 615 IPR027640 GO:0003777|GO:0007018
Rops8g02160 889 Gene3D - 722 887 IPR011989 -
Rops8g02160 889 SUPERFAMILY ARM repeat 625 883 IPR016024 -
Rops8g02160 889 Pfam Armadillo/beta-catenin-like repeat 664 701 IPR000225 GO:0005515
Rops8g02160 889 MobiDBLite consensus disorder prediction 1 45 - -
Rops8g02160 889 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 48 425 IPR027417 -
Rops8g02160 889 ProSitePatterns Kinesin motor domain signature. 290 301 IPR019821 GO:0003777|GO:0005524|GO:0007018
Rops8g02160 889 ProSiteProfiles Kinesin motor domain profile. 48 390 IPR001752 GO:0003777|GO:0005524|GO:0007018|GO:0008017
Rops8g02160 889 SMART arm_5 703 744 IPR000225 GO:0005515
Rops8g02160 889 SMART arm_5 745 785 IPR000225 GO:0005515
Rops8g02160 889 SMART arm_5 621 660 IPR000225 GO:0005515
Rops8g02160 889 SMART arm_5 835 877 IPR000225 GO:0005515
Rops8g02160 889 SMART arm_5 661 702 IPR000225 GO:0005515
Rops8g02160 889 Coils Coil 406 437 - -
Rops8g02160 889 FunFam Kinesin-like protein 40 420 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02160 Rops-Chr8 50005671 50020242 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02160 47 423 Calmodulin-binding Proteins AT5G65930 35.533 1.92e-48 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02160 - K10396 gmx:100789455 1559.66