Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02155 ATGGAAGGGAGAGAAGGTATCAGTTCTGGGGTTACAGTGATAGGAGCAGAAGCTCCATCAACCTATCATGTTGCACCAAGGAGTGAAGCTCCAAGCCAGGGTCCTCCTGTTCCTGAAGCTGCAACTGCAGCTATTGGTGTCTCACCAGTGAGTGTGGGATTGGATGGAATAGCAGTTAAGAAGAAAAGGGGTAGACCAAGGAAATATGGACCAGATGGGTCAGTTACTATGCCATTGTCACCATTGCCAATCTCATCTTCAGCTCCATTTTCTAATGATTTTTCAACTGGGAAGAGGGGGAAACATAAGGGGATGGAGTACAAGCAGTCAAAAAAATTTGGAGTGGACCTTTTAGGTGACTCTGTTGGTACAAACTTCATGCCCCATATCATTACCGTCAATGCTGGTGAGGACATTACAATGAAGGTTATATCTTTTTCCCAACTAGGACCCCGAGCAATATGCATCCTATCTGCTAATGGTGTAATTTCAAATGTTACACTTCGTCAGCCTGATTCTTCTGGGGGAACTTTGACCTATGAGGGCCGTTTTGAGATACTTTCATTGTCTGGATCATTCATGCCTACCGACAGCCAAGGAACAAGAAGCAGGTCCGGTGGGATGAGTGTTTCTTTGTCAAGCCCAGATGGTCGTGTTGTAGGCGGTGGTGTTGCTGGTCTTCTTGTAGCTGCCAGTCCTGTGCAGGTGATTGTGGGAAGTTTTCTGCCAAGCAATCATCAAGACCAGAAACCTAAAAAGCCAAAGTCTGATTATGCACCACCAGCTACTATCACCCCAGCCATTGCAGTGTCTTCTTCAGCACCACCCCCAACAACTAATGGTGACAAGGAGGATGTCATGAGTGGTGGACATTTTCTGCAAAATTCAGGAACCCTTAACTCAAACCTTACACCTCCCTCAGCCTTCAGAAGAGAAAACTGGGTTAACATGCACTCTATGCCAGACTCCATGCACTCAAATATTAACATATCTTTACCTGATAGTTAA 1008 0.4554 MEGREGISSGVTVIGAEAPSTYHVAPRSEAPSQGPPVPEAATAAIGVSPVSVGLDGIAVKKKRGRPRKYGPDGSVTMPLSPLPISSSAPFSNDFSTGKRGKHKGMEYKQSKKFGVDLLGDSVGTNFMPHIITVNAGEDITMKVISFSQLGPRAICILSANGVISNVTLRQPDSSGGTLTYEGRFEILSLSGSFMPTDSQGTRSRSGGMSVSLSSPDGRVVGGGVAGLLVAASPVQVIVGSFLPSNHQDQKPKKPKSDYAPPATITPAIAVSSSAPPPTTNGDKEDVMSGGHFLQNSGTLNSNLTPPSAFRRENWVNMHSMPDSMHSNINISLPDS* 336
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02155 335 ProSiteProfiles PPC domain profile profile. 123 264 IPR005175 -
Rops8g02155 335 FunFam AT-hook motif nuclear-localized protein 1-like 128 258 - -
Rops8g02155 335 Pfam Plants and Prokaryotes Conserved (PCC) domain 128 241 IPR005175 -
Rops8g02155 335 MobiDBLite consensus disorder prediction 18 40 - -
Rops8g02155 335 PANTHER AT-HOOK MOTIF NUCLEAR-LOCALIZED PROTEIN 9 28 307 IPR039605 GO:0003680
Rops8g02155 335 MobiDBLite consensus disorder prediction 242 304 - -
Rops8g02155 335 CDD DUF296 128 218 IPR005175 -
Rops8g02155 335 Gene3D - 128 258 - -
Rops8g02155 335 MobiDBLite consensus disorder prediction 62 81 - -
Rops8g02155 335 SUPERFAMILY AF0104/ALDC/Ptd012-like 126 246 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02155 Rops-Chr8 49863947 49874040 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02155 6 332 AT-hook Motif Nuclear Localized (AHL) Family AT4G12080 51.105 7.63e-98 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02155 - - gmx:100777213 486.493
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02155 8 49863947 49874040 Rops8g02155 8 49863947 49874040 ECH
Rops8g02155 8 49863947 49874040 Rops4g01286 4 34169202 34175152 PCT