Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02149 ATGGATACTGCAGGTGACAAGAATCCATTTGGTGCCTCTCGTCTCCATATGGTACATGTTGATGATGTGGCTAGAGCACATATATTCCTGCTTGAGCATCCTAATCCAAAAGGAAGATATAATTGCTCACCATTCCTTGCAACTATGGAAGAAATAGTTGAACTTCTTTCTGCCAAATATCCAGAATTTCCAATACCAACACCAGACGAGCTGAAGAAGATTGAAGGTCCCAAGGTTCCAGATTTAGCTTCGAATAAACTCATGGATGCTGGATTCGTGTTCAAGCATAGTCTTGAGGAAATGTTTGAGGATGCAATTCAATGCTGCAAGGAAAAGGGTTATTTGTGA 348 0.408 MDTAGDKNPFGASRLHMVHVDDVARAHIFLLEHPNPKGRYNCSPFLATMEEIVELLSAKYPEFPIPTPDELKKIEGPKVPDLASNKLMDAGFVFKHSLEEMFEDAIQCCKEKGYL* 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02149 115 Gene3D - 1 115 - -
Rops8g02149 115 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 13 106 - -
Rops8g02149 115 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 12 113 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02149 Rops-Chr8 49791960 49792451 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02149 15 115 Monolignol Biosynthesis Gene Families AT2G02400 31.683 1.35e-12 60.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02149 - K13265 gmx:102659875 199.904
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02149 8 49791960 49792451 Rops8g02149 8 49791960 49792451 ECH