Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02131 ATGGCTGAGTTCAGAGAGAGTGGTGAAAGAGGTATGTTGGACAGTGGTGTTAATAGTGGTAACATTTCTGAGATGCAACAGATCCATCACCAAGCTCCTCTGTCTGTTGATGGTGCCTTGGACAAATGGGTTTATTCCCTCTTCCCATATTTTCATACATGGAAGCAACACTATGGTTCAATGTTCATGTACTCCACCGGGATTAAGCAACATCTATATGTGGGGAAGCCTGAATTAATAAAAGAGTTGAACTTGCATACATCTTTGGATCTAGGCAGGCCTTCCTATCTAACCAAAACATTGAAGCCAATGTTGGGTGCTGGCATCCTTAGGGTCAATGGGCCACAATGGGCTTTCCAAAGGAATCTTATTGCTCCTGAGTTTTTCCTTACCAAAATTAAGACTATGGTGGATTATATGGAAGAATCAACCATGGCAGTTATCAGAACATGGGAGAGTCGCATAACAAAAAGTGAAGGAGGGATTGCAGAGATGGTGATTGATGCTGATATGAAGGTGCTTACAGGGGATGTCATTTCCAAAGCTTGTTTTGGCAGCTCTTATGAACAAGGCAATCAATTTTTTGCAAAATTAGCCACTATGCAAGCTGCATTATCAAAGCCTAGTATCCTATTTGGATTTCTCAACCTAAGTTTTCTTCCCACCAAGGAAAACAAAGAGATGTTGAAGTTGGAGAAAAAGGTGGAAATGCTGATACTGAAAATCATAAATGATCGTGAAGATGAAAACCAAAAGAATAGCATATATGGGAATCAAAAGGATCTATTACAAACAATACTAGAAAGTGCTGCAAGTAACAAGAATAACATGAACCGATTGATTATAGATATGTGCAAAAATATCTACTTTGCAGGCTCTGAGACTAGTGCCCTTGCAGCTACTTGGACACTGATGTTGCTTGCTTTACATCCTGATTGGCAACAACGTGTTAGATCTGAGATTGTGGAGACCTATGGTAACATGTCACCTCATTCTTTTCGTGACATGGACAAACTTCGAAAGTTGAAAGCACTATCAATGGTGATTCATGAGAGTCTACGTCTTTATGGGCCTGCTGTTGTAATCTCAAGGGAAGTTTTGGCTGAGATGAAACTGGGGGAACTTGTGCTGCCTAAAGGCATCAACACATGGTTGTTCTTGCCTGCATTGCACCGTGACCCTGATAATTGGGGACAATATGCTAATGAGTTCAAGCCAGAAAGGTTTGCAGGTGGTGTTTCTGCAGCATGTAAGTATCCACATGCTTATATACCATTTGGCCTTGGGAGTAGAATTTGCTTAGGCCAAAACTTTGCCATGACAGAAATCAAGGTCATACTCTGTCTTCTTCTGTTTAACTTCTCCTTTTCTCTTTCACCAAATTATAATCATTGCCCAGTGTATAAAATGTTGTTATTGCCAAAATATGGTGTAAGGCTTCTTGTTAGCAAGGTTCAATAG 1461 0.4038 MAEFRESGERGMLDSGVNSGNISEMQQIHHQAPLSVDGALDKWVYSLFPYFHTWKQHYGSMFMYSTGIKQHLYVGKPELIKELNLHTSLDLGRPSYLTKTLKPMLGAGILRVNGPQWAFQRNLIAPEFFLTKIKTMVDYMEESTMAVIRTWESRITKSEGGIAEMVIDADMKVLTGDVISKACFGSSYEQGNQFFAKLATMQAALSKPSILFGFLNLSFLPTKENKEMLKLEKKVEMLILKIINDREDENQKNSIYGNQKDLLQTILESAASNKNNMNRLIIDMCKNIYFAGSETSALAATWTLMLLALHPDWQQRVRSEIVETYGNMSPHSFRDMDKLRKLKALSMVIHESLRLYGPAVVISREVLAEMKLGELVLPKGINTWLFLPALHRDPDNWGQYANEFKPERFAGGVSAACKYPHAYIPFGLGSRICLGQNFAMTEIKVILCLLLFNFSFSLSPNYNHCPVYKMLLLPKYGVRLLVSKVQ* 487
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02131 486 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 426 435 IPR017972 GO:0005506|GO:0016705
Rops8g02131 486 SUPERFAMILY Cytochrome P450 44 482 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PRINTS E-class P450 group I signature 423 433 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PRINTS E-class P450 group I signature 280 297 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PRINTS E-class P450 group I signature 55 74 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PRINTS E-class P450 group I signature 300 326 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PRINTS E-class P450 group I signature 174 192 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PRINTS E-class P450 group I signature 433 456 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PRINTS P450 superfamily signature 433 444 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PRINTS P450 superfamily signature 291 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PRINTS P450 superfamily signature 424 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PRINTS P450 superfamily signature 347 358 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 PANTHER CYTOCHROME P450 FAMILY MEMBER 5 477 - -
Rops8g02131 486 Gene3D Cytochrome P450 18 486 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Rops8g02131 486 Pfam Cytochrome P450 49 480 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02131 Rops-Chr8 49466921 49471311 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02131 79 482 Cytochrome P450 AT5G24900 43.373 2.48e-125 369
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02131 - - gmx:100801472 655.595