Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02120 ATGCCGGTTCTGAGAATTCATGGATATGCCTTGGCTGTTTTGTTTTGTTTTATCATTTTCAAAGCAGCCTCACAAAGAACAGATCCTTCAGAAGTACAAGCTCTGAGAGACATCAAAAAGAGTTTGATTGATCCCATGAACAATTTGAGGAACTGGAATAAGGGTGATCCCTGTGCATCAAACTGGACTGGGGTTTGGTGTTTTGATAAGAAGGGTTCTGATGGTTACTTCCATGTTCAAGAGCTGTACCTAATGACTATGAATCTCTCGGGAAGTCTATCACCTCAGCTTGGTCAGCTATCCCAGCTGGAGATACTGGATTTCATGTGGAACAATCTGACAGGCACAATACCAAAGGAGATTGGAAATATTGCACCATTGATTCTCCTGCTCCTGAATGGGAATAATTTATCTGGTAGTTTACCAGATGAGCTTGGCAATCTTTCAAAATTGAATAGACTCCAAGTTGATGAAAACAAATTGTCAGGTCTTGTACCAGAATCATTTGCCAACTTGATCAAGGTTAAGCACCTCCACATGAATAACAACTCATTTACTGGTCAAGTTCCATCCAAACTTTCAAACCTATCCCACCTTACGCACTTGCTTTTGGACAACAATAACTTATCTGGCTACCTTCCACCAGAATTCTCCATGTCACGCAGTTTGGAAATACTTCAACTTGATAATAATAATTTCCGCGGGAGTGGAATTCCTTCTACCTATGCAAACTTATCCAGGCTAGTAAAAATAAGTCTAAGGAACTGCAGTCTGCAAGGAGCTGTTCCTGATTTCAGTTCACTACCCAATCTTAGCTATCTAGATCTTAGCTGGAATAGGCTTACTGGAGACATACCATCAAAGAAACTTTCAGACAATATGACAACTATTGATCTGTCCAATAATCATCTCAATGGATCTATTCCTCGAAACTTTTATCCTCATCTTCAAAAATTGGCACTTGAAAACAATTTATTGTCTGGATCCATCCCTGCTAGCATATGGCAGAACATATCCTTCAGTAGGGGAGCCAAACTTGCAATTGATCTACACAACAACTTACTTTCAGACATTTTGGGAAATCTGAACCCCCCAGCAAATGTTAGCTTGAGGCTTTCTGGCAATCCTGTCTGCAAGGATTCTAACATACAAAGTATTGGTCAATATTGTGGACTTGAAGGGGATGAAGTAGACCAAGACTCAACAAATTCATCTTGTCAAGTTCAATCTTGTCCAATAGACAATTTCTTTGAATATGCCCCATCTTCTCCAGTTCCTTGTTATTGTGCAGCACCTCTGAGAATTGGATACAGGCTGAAAAGTCCAAGTTTTGTTTACTTTCCTCCCTACAGAACTCGTTTTGAATCATATATAACTAATTCCTTAAACTTACACCCCTATCAGTTATCAGTAGCTTCATATGCTTGGGAAGTGGGACCTCGTCTTGGAATGTATTTAAAATTTTTTCCTTCTTATAATGATTCTCACTCCAATATGTTCAATAAAAGTGAGACCCGTCGCATTAAAGGCATATTTACATCATGGAAATTTCCTCACACTGAAATTTTTGGACCATATGAACTACTGAACTTCACTCTTCTGGGACCTTATGCAGAATTGAATGTTGATTTAGAGAGGAGTAAAACAAGTCCGGGCATAATAATTGCTGCTGTAATAGCAGCTGTTGCTTGTGTTTTAGCAATAACTGCATTAGTCGTTCTCCTCATTTCTAGAAGACAAGCGAAAAACCAGCACTCAAATTCCAGGAAACGTATGTCCTCTAATATATCTATCAAAATAGATGGTGTGAAAGCATTTACTTTTAAAGAATTGGCTCTTGCAACTAACAAATTTAATATCTCAACCAAAGTTGGCCAAGGAGGTTATGGGAATGTCTATAAAGGCATTTTATATGATGATACACTTGTTGCCATTAAGAGAGCAGAAGAAAATTCATTACAAGGCCAAAAAGAGTTTTTGACTGAGATTGAGCTTTTATCAAGGTGTCACCATCGAAATCTTGTCTCACTGGTTGGCTACTGTAATGAAGAAGGGGAGCAGATGCTGGTCTATGAATTCATGCCCAATGGCACCCTAAGGGAATGGATTTCTGGTAAAAAGAAAATAGGCAAGGAAGGCCTAAATTTTTGTATGAGGTTACGAATTGCCCTTGGTGCAGCCAAAGGCATACTATATCTGCATACAGAGGCTGACCCTCCTATATTCCACCGAGATATTAAAGCCAGTAACATTCTTCTGGACTCCAAATTTACAGCTAAAGTGGCTGATTTTGGACTGTCACGGCTTGTATCATACTCAGATGAAGTAGGAAATGCTCCTAAATATGTGTCAACAGTTGTGAAGGGAACTCCAGGCTACTTGGACCCAGAATATATGTTGACTCATAAGTTGACTGACAAAAGTGATGTGTATAGCCTAGGAATTGTGTTTCTGGAGCTTTTGACTGGCATGCAACCAATTTCACGTGGTAAAAACATTGTCCGTGAGGTTAATGCTGCTTGTCAATCTGGCATGATACATTCCATTATAGATAGCAAAATGGGTTTACATCCATCTGATTGCTTGGACAAGTTTTTAGCTCTGGCCCTCGGTTGTTGCCAAGACAATCCAGAGGAGAGACCATCAATGCTAGATGTGGTGAGGGAACTAGAAGATATCATTGCAATGTTACCTGAAACTGAAACTAGTTTCTCAGATGTTGCCTTAGATAATTCTAGTAAAATGGCACCTTCATCATCAACGTCACCATCAGTATCAGGTTCCAACATGACAAGGAAGGACCAACACATGTCTTCATATGTTTCAGGAAGTGATCTTGTTAGTGATGTAATTCCCACCATTGTTCCTCGCTGA 2874 0.3949 MPVLRIHGYALAVLFCFIIFKAASQRTDPSEVQALRDIKKSLIDPMNNLRNWNKGDPCASNWTGVWCFDKKGSDGYFHVQELYLMTMNLSGSLSPQLGQLSQLEILDFMWNNLTGTIPKEIGNIAPLILLLLNGNNLSGSLPDELGNLSKLNRLQVDENKLSGLVPESFANLIKVKHLHMNNNSFTGQVPSKLSNLSHLTHLLLDNNNLSGYLPPEFSMSRSLEILQLDNNNFRGSGIPSTYANLSRLVKISLRNCSLQGAVPDFSSLPNLSYLDLSWNRLTGDIPSKKLSDNMTTIDLSNNHLNGSIPRNFYPHLQKLALENNLLSGSIPASIWQNISFSRGAKLAIDLHNNLLSDILGNLNPPANVSLRLSGNPVCKDSNIQSIGQYCGLEGDEVDQDSTNSSCQVQSCPIDNFFEYAPSSPVPCYCAAPLRIGYRLKSPSFVYFPPYRTRFESYITNSLNLHPYQLSVASYAWEVGPRLGMYLKFFPSYNDSHSNMFNKSETRRIKGIFTSWKFPHTEIFGPYELLNFTLLGPYAELNVDLERSKTSPGIIIAAVIAAVACVLAITALVVLLISRRQAKNQHSNSRKRMSSNISIKIDGVKAFTFKELALATNKFNISTKVGQGGYGNVYKGILYDDTLVAIKRAEENSLQGQKEFLTEIELLSRCHHRNLVSLVGYCNEEGEQMLVYEFMPNGTLREWISGKKKIGKEGLNFCMRLRIALGAAKGILYLHTEADPPIFHRDIKASNILLDSKFTAKVADFGLSRLVSYSDEVGNAPKYVSTVVKGTPGYLDPEYMLTHKLTDKSDVYSLGIVFLELLTGMQPISRGKNIVREVNAACQSGMIHSIIDSKMGLHPSDCLDKFLALALGCCQDNPEERPSMLDVVRELEDIIAMLPETETSFSDVALDNSSKMAPSSSTSPSVSGSNMTRKDQHMSSYVSGSDLVSDVIPTIVPR* 958
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02120 957 FunFam LRR receptor-like serine/threonine-protein kinase HSL2 694 906 - -
Rops8g02120 957 Gene3D Ribonuclease Inhibitor 288 414 IPR032675 -
Rops8g02120 957 ProSiteProfiles Protein kinase domain profile. 618 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02120 957 SMART serkin_6 618 894 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02120 957 SUPERFAMILY Protein kinase-like (PK-like) 603 926 IPR011009 -
Rops8g02120 957 FunFam Probable LRR receptor-like serine/threonine-protein kinase At1g06840 29 190 - -
Rops8g02120 957 Pfam Leucine rich repeat 150 209 IPR001611 GO:0005515
Rops8g02120 957 Gene3D Ribonuclease Inhibitor 28 287 IPR032675 -
Rops8g02120 957 MobiDBLite consensus disorder prediction 910 941 - -
Rops8g02120 957 CDD STKc_IRAK 624 893 - -
Rops8g02120 957 SUPERFAMILY L domain-like 238 384 - -
Rops8g02120 957 FunFam Leucine-rich repeat protein kinase family protein 582 693 - -
Rops8g02120 957 Gene3D Transferase(Phosphotransferase) domain 1 694 910 - -
Rops8g02120 957 ProSitePatterns Protein kinases ATP-binding region signature. 624 646 IPR017441 GO:0005524
Rops8g02120 957 SUPERFAMILY L domain-like 27 287 - -
Rops8g02120 957 Gene3D Phosphorylase Kinase; domain 1 588 693 - -
Rops8g02120 957 Pfam Protein kinase domain 619 888 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02120 957 ProSitePatterns Serine/Threonine protein kinases active-site signature. 741 753 IPR008271 GO:0004672|GO:0006468
Rops8g02120 957 PANTHER RECEPTOR-LIKE PROTEIN 55 38 893 - -
Rops8g02120 957 SMART LRR_typ_2 100 124 IPR003591 -
Rops8g02120 957 SMART LRR_typ_2 148 171 IPR003591 -
Rops8g02120 957 SMART LRR_typ_2 313 337 IPR003591 -
Rops8g02120 957 SMART LRR_typ_2 268 293 IPR003591 -
Rops8g02120 957 SMART LRR_typ_2 196 219 IPR003591 -
Rops8g02120 957 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02120 Rops-Chr8 49313787 49323471 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02120 5 902 Receptor kinase-like Gene Family AT5G01950 60.442 0.0 1087
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VIII-1 Rops8g02120 Pkinase 1e-48 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02120 - - gmx:100815005 1443.71