Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02115 ATGATGCTACAGTCCCACTTTGTCACAATTTTCATACTCCTGCTTGTGTTTTCTCAAACTATAGCTGATCTACATTCAGAAAAGCAAGCCCTCCTTGATTTTGCTGCTGCAGTTCATCATGGTCATAAAGTAAATTGGAACTCTGGTATCTCAATCTGCACTTCTTGGGTGGGAGTTACATGCAGCTCTGATGGCTCACATGTGCTTTCTCTGAGGCTTCCAGGTGTTGGACTGAGAGGTTCTATCCCAATAAACACACTTGGTAAGCTAAATGGCCTCATCAGTCTCAGTCTTAGGTCCAATAGCTTGAGTGGGAACCTTCCAAGTGACATGCTTTCCCTTCCTTCTCTTCGGTTCATATATCTGCAACGTAACAACTTTTCAGGTGATATTCCTGATTCTTTGCCACCCCGGCTTATCTTTCTTGATTTGTCCTATAACTCTTTCACAGGAAAAATTCCAGCCTCAATCCAAAACTTGACATATCTAATAGGACTGAACCTCCAAAACAACTCTCTTAGAGGACCTATTCCTGATGTTAACCTTCCTAACCTTAAGAATTTGGATTTGAGCTTCAACTACCTGAATGGTTCCATTCCTTCATCACTCCATAAGTTTCCTGCTTCCTCATTTAAAGGGAATTTGATGTTATGTGGAGCTCCTTTGAAACAATGTTCTTCAGTTTCCCCTACTCCCACTTTATCACCATTAACAGTCTCCCAAAAACCAAGTGATCTCTCAGACAAGAAGCTGAGTACAGGAGAAAAATTTGCTATTTCTTTGGGGGGTTTCGCACTGCTGTTTCTTCCAGTTCTTATAGTAGTGTTCTGCTGTTTCAAGAAAAAATTAGTTGAACAAAATGTAGCACCTAAAGAGAAGAAGGGTGAGAAGAAGCTTAGGGAGGATTTTGGGAGTGGTGTGCAAGAACCTGAGAGAAACAAGCTGATATTTTTTGAAGGTAGTTCTTATAACTTTGATCTTGAGGATTTGTTAAGAGCCTCAGCTGAAGTGCTTGGAAAGGGAAGTTGTGGAACAACATATAAAGCCATCTTGGAGGAAGGGACAACAGTGGTAGTGAAGAGGTTAAAAGAAGTGGCGATGGGGAAAAAAGAATTTGAACAGCAAATGGAAATTGTCCAAAGGGTTGATCACCACCCAAATGTGGTTCCCCTTCGTGCTTACTATTATTCCAAGGATGAAAAATTGATGGTTTACGACTACTTCACATATGGCAGCTTTTCCAAGTTATTGCATGGAACAAGGGAAACTGGACGAACTCCACTGGATTGGGATTCCAGATTGAAGATCATGGCTGGAGCTGCCAGGGGCGTTGCTCATATCCACTCAGCCAATGGAAGGAAATTAGTTCATGGCAATATAAAATCATCTAATGTGCTTCTCTCAAGAGATCTTCAAGGCTGCATATCAGATTTTGGCTTAACTCCTCTAACAAGTTTCTGTGTCTCCTCCAAAAGTCCAGGCTACAAAGCACCTGAGATTATTGAAACCAGAAAATCCACCCAAAAATCTGATGTATACAGCTTTGGAGTTCTCCTTCTTGAGATGCTAACTGGCAAAACACTAGTTCAGCATTCAGGGCATGAAGATGTGGTTGATCTTCCAAAGTGGGTCCAATCTGTTGTTAGAGAGGAATGGACTGCTGAAGTGTTTGATCTTGAGCTAATGAGATATCCAAACATTGAAGAAGAACTGGTACAGATGTTGCAACTGGCAATGGCATGTGTGGCAGTGATGCCTGACACAAGACCTTCAATGGAGGAAGTTGTTAGGATAATTGAAGACATCAGAGCATCCATTTCTTAA 1824 0.4145 MMLQSHFVTIFILLLVFSQTIADLHSEKQALLDFAAAVHHGHKVNWNSGISICTSWVGVTCSSDGSHVLSLRLPGVGLRGSIPINTLGKLNGLISLSLRSNSLSGNLPSDMLSLPSLRFIYLQRNNFSGDIPDSLPPRLIFLDLSYNSFTGKIPASIQNLTYLIGLNLQNNSLRGPIPDVNLPNLKNLDLSFNYLNGSIPSSLHKFPASSFKGNLMLCGAPLKQCSSVSPTPTLSPLTVSQKPSDLSDKKLSTGEKFAISLGGFALLFLPVLIVVFCCFKKKLVEQNVAPKEKKGEKKLREDFGSGVQEPERNKLIFFEGSSYNFDLEDLLRASAEVLGKGSCGTTYKAILEEGTTVVVKRLKEVAMGKKEFEQQMEIVQRVDHHPNVVPLRAYYYSKDEKLMVYDYFTYGSFSKLLHGTRETGRTPLDWDSRLKIMAGAARGVAHIHSANGRKLVHGNIKSSNVLLSRDLQGCISDFGLTPLTSFCVSSKSPGYKAPEIIETRKSTQKSDVYSFGVLLLEMLTGKTLVQHSGHEDVVDLPKWVQSVVREEWTAEVFDLELMRYPNIEEELVQMLQLAMACVAVMPDTRPSMEEVVRIIEDIRASIS* 608
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02115 607 Gene3D Ribonuclease Inhibitor 25 137 IPR032675 -
Rops8g02115 607 Pfam Leucine Rich Repeat 184 206 IPR001611 GO:0005515
Rops8g02115 607 Pfam Leucine Rich Repeat 138 160 IPR001611 GO:0005515
Rops8g02115 607 PANTHER OS05G0588300 PROTEIN 7 603 - -
Rops8g02115 607 FunFam pollen receptor-like kinase 1 301 407 - -
Rops8g02115 607 Gene3D Transferase(Phosphotransferase) domain 1 409 606 - -
Rops8g02115 607 Pfam Leucine rich repeat N-terminal domain 26 62 IPR013210 -
Rops8g02115 607 Gene3D Phosphorylase Kinase; domain 1 300 407 - -
Rops8g02115 607 ProSiteProfiles Protein kinase domain profile. 332 606 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02115 607 SUPERFAMILY Protein kinase-like (PK-like) 336 600 IPR011009 -
Rops8g02115 607 Pfam Protein kinase domain 335 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02115 607 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 408 607 - -
Rops8g02115 607 Gene3D Ribonuclease Inhibitor 138 227 IPR032675 -
Rops8g02115 607 FunFam Probable inactive receptor kinase RLK902 24 181 - -
Rops8g02115 607 SUPERFAMILY L domain-like 40 221 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02115 Rops-Chr8 49247371 49249727 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02115 10 607 Receptor kinase-like Gene Family AT5G58300 61.818 0.0 739
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Rops8g02115 Pkinase 4.2e-38 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02115 - - gmx:100796675 1001.89