Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02106 ATGTTTGCTCCTACAATGGTGTTTTGTGCTCCTGCTCTTGATGACCCCAAATTGAGTGTGGTTGCTAGTGTTGATCTTAACCATGCAGATATTGCTGGGCACCTCCCAGAAGAGTTAGGCCTCTTGAAAGATATTGCATTTTTCCACATTAACTCTAATAGATTATGTGGAATTGTCCTAGATAGCTTTGAGAGTCTCACTCTTTTGCATGAGTACGATATAAGCAATAACCACTTTGTTGGTGATTTTTCTTCTATGGTCCTCAAATTGCCAAACTTGAAGTACTTGGATATCAAATTCAATGACTTTGAAGGAGTTTTGCCTCCACAACTATTTGAGAAGGAACTTGATACAATAATTTTGAACAACAACCGTTTCACATTTGTTATCCCAAAAACTTTAGGAAAATCCAAGGCTTTTGTTGTGACCTTTGCCAATAATAATTTCACATGTTGTATTCCAAAATCTATAGGGAACACGGTGAACTTGAAGGAGGTTGTCTTCTTGGACAATGACCTTGGAGGTTGA 528 0.3788 MFAPTMVFCAPALDDPKLSVVASVDLNHADIAGHLPEELGLLKDIAFFHINSNRLCGIVLDSFESLTLLHEYDISNNHFVGDFSSMVLKLPNLKYLDIKFNDFEGVLPPQLFEKELDTIILNNNRFTFVIPKTLGKSKAFVVTFANNNFTCCIPKSIGNTVNLKEVVFLDNDLGG* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02106 175 Gene3D Ribonuclease Inhibitor 10 175 IPR032675 -
Rops8g02106 175 PANTHER LEUCINE-RICH REPEAT EXTENSIN-LIKE PROTEIN 3-RELATED 7 175 - -
Rops8g02106 175 SUPERFAMILY L domain-like 13 173 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02106 Rops-Chr8 49158078 49158605 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02106 5 175 Trihelix Transcription Factor Family AT4G33970 67.836 6.73e-80 248
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02106 - - gmx:100803354 266.159