Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Rops8g02100 | ATGATGCAATTCAGCATATGTATGCTGTTTCTGATTCTTTTTGGTCCAGTTTTGCTCCCAGTGCTCTCTGTGGATCCTGGTTTCAATGATGATGTGTTGGGGTTGATTGTGTTTAAGGCTGGTTTACAAGACCCAAAGCATAAACTTTCTTCTTGGAATGAAGATGATTATAGTCCTTGCAACTGGGAAGGGGTCAAATGTGATCCTTCATCCAATAGGGTCACTGCTCTTGTCCTTGATGGGTTCTCTCTTTCTGGGCATGTTGATAGAGGCCTATTGAGATTGCAGCTCCTTCAAATTCTCTCACTTTCTGGGAATAACTTCACAGGGTCCATAAACCCTGATCTTCCACGCCTTGGGAGTTTGCAAGTTGTTGACTTGAGTGATAACAACCTTTCTGGGACAATCCCTGAAGGGTTTTTCCAACAATGTGGTTCTTTGAGAACAGTTTCCTTTGCCAAGAACAACCTTACAGGTAAGATTCCTGATTCTTTGAGCTCATGTTCCACATTGGCAACTGTTAACTTCTCCTCTAATCAACTTTATGGGGAATTGCCATCTGGGGTGTGGTATTTGAGGGGACTACAGTCACTTGATCTGTCAAATAACTTGCTGGAAGGAGAGATTCCTGAAGGAATTCAGAATCTGTATGATATGAGGGAGTTGAGTCTACAGAATAATCACTTTACTGGCAAGCTTCCTGGGGATATTGGAGGCTGCATAGTTTTGAAATCACTTGACTTGAGTGATAATTTTCTCTCTGGGGAACTTCCTCAGTCATTGCAAAGACTCACTTCATGCACATCACTCAGTTTGCATGGAAATTCATTCACAGGAGGCATTCCACACTGGATTGGAGAGTTAAAAGATCTAAAGATATTGGATCTTTCTGCAAATAGATTTTCTGGTTGGATTCCAAAATCTTTAGGAAATCTAGACTCTTTGCATAGATTAAATATATCCAGGAATCAGTTCACAGGAAACTTGCCTGATTCAATGTTAAACTGCACTAAGCTTTTGGCTCTTGATATCAGCCACAATCAGTTGGCAGGCCATCTTCCTTCATGGATTTTTAGGATGGGTTTACAAAGTATCTCTCTTTCTGGGAATAGCTTTGGTAAGGGCAACAATTATCCTTCACTCAAGTCCACACCTGCATCTTATCATGGTCTTGAGGTTTTGGATTTGTCATCCAATGCATTTTCTGGTGAACTTCCATCTGGCATTGGGGCTCTTAGTAGCCTTCAAGTCCTCAATATGTCAACCAACAATATCTCTGGTTATATTCCTGTTGGTATAGGAGAACTTAAATCTTTATACATTATCGACTTAAGTGACAACAAGCTCAATGGAAGCATCCCTCCTGAAATAGAAGGGGCAATTTCACTCAGTGAACTGAGGCTACAAAAGAACTTCCTTGGTGGAAAAATTCCAGTCCAAATTGAGAAGTGTTCATCTCTAACATCTTTGATTCTTTCTCACAACAAGCTTACTGGTTCAATCCCTGCAGCCATTGCAAACCTATCCAATCTTCAGTATGTTGATTTATCACGGAATGAACTCTCTGGAAGTTTACCCAAGGAGCTGACAAATCTTTCCCATCTTCTATCATTTAATGTATCCTACAACCAACTTCAAGGTGAACTACCAGTTGGTGGCTTCTTCAACACCATCCCCTCCTCATCTGTCTCTGGTAACACATTGTTGTGTGGTTCTGTTGTCAACCACTCCTGCCCATCTGTTCATCCCAAACCTATTGTCTTAAATCCCAATTCTTCTAGTTCCAACTCCAGCATTTCCTCACAAAATCATCGACATAAGATCATACTCAGTATCTCAGCTCTCATTGCTATTGGAGCAGCTGCTTTTATTGCCATTGGTGTGGTGGCAATTACTGTCCTAAATATCCGTGTGCGGTCTTCAATGGAACGTGCTCCTGCTACATTTGCATTCTCTGGTGGTGAGGACTATAGTTGTTCACCGGCGAATGATCCAAACTATGGCAAGCTTGTCATGTTTTCTGGTGATGCAGACTTTGCTGATGGAGCTCATAATCTTCTCAATAAAGACAGTGAAATAGGTCGTGGTGGATTTGGAGTTGTTTATCGCACTTTCCTTCGAGACGGGCATGCTGTTGCAATCAAGAAGCTCACAGTCTCCAGTTTGATCAAGTCCCAAGAAGACTTTGAGAGGGAAGTGAAGAAGCTTGGGAAGATCAGGCACCAGAATCTTGTAGCACTTGAAGGTTATTATTGGACTTCATCCTTGCAGCTCCTCATTTATGAGTACCTATCCAGAGGGAGTTTGCATAAGCTTCTACATGATGATAATAGCAAAGATGTCTTCTCTTGGAGACAAAGGTTCAAGATTATTCTTGGCATGGCAAAAGGGTTGGCTCATTTGCACCAAGTGAACACAATCCACTACAATCTTAAATCAACCAATGTTCTGATTGATTGTTCTGGTGAGCCAAAAATAGGAGATTTTGGCTTGGTGAAACTATTGCCAGTGCTAGACCATTGTGTTTTGAGCAGCAAAATTCAAAGTGCACTTGGATACATGGCTCCTGAGTTTGCTTGCCGCACAGTTAAGATAACTGAGAAATGTGATGTATATGGTTTTGGGATCCTGGTTCTTGAGGTGGTGACAGGAAAAAGACCTGTGGAATATATGGAGGATGATGTGGTAGTTCTCTGTGACTTGGTGAGGGGTGCATTGGAAGAAGGCAAAGTGGAGCAATGTATTGATGGAAGGCTCATGGGAAATTTTGCTGCTGAGGAAGCAATTCCTGTGATAAAATTGGGGTTGATTTGTGCATCACAAGTGCCATCAAACCGTCCAGATATGGCTGAGGTAATCAACATATTAGAGTTAATCCAGTGCCCTTCAGAAGGACAAGAGGAATTAGAATGA | 2913 | 0.4174 | MMQFSICMLFLILFGPVLLPVLSVDPGFNDDVLGLIVFKAGLQDPKHKLSSWNEDDYSPCNWEGVKCDPSSNRVTALVLDGFSLSGHVDRGLLRLQLLQILSLSGNNFTGSINPDLPRLGSLQVVDLSDNNLSGTIPEGFFQQCGSLRTVSFAKNNLTGKIPDSLSSCSTLATVNFSSNQLYGELPSGVWYLRGLQSLDLSNNLLEGEIPEGIQNLYDMRELSLQNNHFTGKLPGDIGGCIVLKSLDLSDNFLSGELPQSLQRLTSCTSLSLHGNSFTGGIPHWIGELKDLKILDLSANRFSGWIPKSLGNLDSLHRLNISRNQFTGNLPDSMLNCTKLLALDISHNQLAGHLPSWIFRMGLQSISLSGNSFGKGNNYPSLKSTPASYHGLEVLDLSSNAFSGELPSGIGALSSLQVLNMSTNNISGYIPVGIGELKSLYIIDLSDNKLNGSIPPEIEGAISLSELRLQKNFLGGKIPVQIEKCSSLTSLILSHNKLTGSIPAAIANLSNLQYVDLSRNELSGSLPKELTNLSHLLSFNVSYNQLQGELPVGGFFNTIPSSSVSGNTLLCGSVVNHSCPSVHPKPIVLNPNSSSSNSSISSQNHRHKIILSISALIAIGAAAFIAIGVVAITVLNIRVRSSMERAPATFAFSGGEDYSCSPANDPNYGKLVMFSGDADFADGAHNLLNKDSEIGRGGFGVVYRTFLRDGHAVAIKKLTVSSLIKSQEDFEREVKKLGKIRHQNLVALEGYYWTSSLQLLIYEYLSRGSLHKLLHDDNSKDVFSWRQRFKIILGMAKGLAHLHQVNTIHYNLKSTNVLIDCSGEPKIGDFGLVKLLPVLDHCVLSSKIQSALGYMAPEFACRTVKITEKCDVYGFGILVLEVVTGKRPVEYMEDDVVVLCDLVRGALEEGKVEQCIDGRLMGNFAAEEAIPVIKLGLICASQVPSNRPDMAEVINILELIQCPSEGQEELE* | 971 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Rops8g02100 | 970 | SUPERFAMILY | Protein kinase-like (PK-like) | 688 | 960 | IPR011009 | - | |
Rops8g02100 | 970 | SMART | LRR_sd22_2 | 192 | 215 | - | - | |
Rops8g02100 | 970 | SMART | LRR_sd22_2 | 508 | 534 | - | - | |
Rops8g02100 | 970 | SMART | LRR_sd22_2 | 288 | 314 | - | - | |
Rops8g02100 | 970 | SMART | LRR_sd22_2 | 436 | 459 | - | - | |
Rops8g02100 | 970 | Gene3D | Ribonuclease Inhibitor | 307 | 584 | IPR032675 | - | |
Rops8g02100 | 970 | Gene3D | Ribonuclease Inhibitor | 29 | 306 | IPR032675 | - | |
Rops8g02100 | 970 | CDD | STKc_IRAK | 693 | 959 | - | - | |
Rops8g02100 | 970 | SUPERFAMILY | L domain-like | 288 | 563 | - | - | |
Rops8g02100 | 970 | Gene3D | Phosphorylase Kinase; domain 1 | 676 | 763 | - | - | |
Rops8g02100 | 970 | Pfam | Leucine Rich Repeat | 243 | 264 | IPR001611 | GO:0005515 | |
Rops8g02100 | 970 | Pfam | Leucine Rich Repeat | 195 | 216 | IPR001611 | GO:0005515 | |
Rops8g02100 | 970 | Gene3D | Transferase(Phosphotransferase) domain 1 | 764 | 968 | - | - | |
Rops8g02100 | 970 | ProSiteProfiles | Protein kinase domain profile. | 687 | 959 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g02100 | 970 | FunFam | probable LRR receptor-like serine/threonine-protein kinase IRK | 681 | 763 | - | - | |
Rops8g02100 | 970 | Pfam | Protein kinase domain | 688 | 894 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Rops8g02100 | 970 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase IRK | 308 | 582 | - | - | |
Rops8g02100 | 970 | PANTHER | LEUCINE RICH REPEAT KINASE 2 | 213 | 958 | - | - | |
Rops8g02100 | 970 | SUPERFAMILY | L domain-like | 46 | 372 | - | - | |
Rops8g02100 | 970 | ProSitePatterns | Protein kinases ATP-binding region signature. | 693 | 716 | IPR017441 | GO:0005524 | |
Rops8g02100 | 970 | FunFam | probable LRR receptor-like serine/threonine-protein kinase IRK | 764 | 965 | - | - | |
Rops8g02100 | 970 | Pfam | Leucine rich repeat N-terminal domain | 29 | 68 | IPR013210 | - | |
Rops8g02100 | 970 | FunFam | Putative LRR receptor-like serine/threonine-protein kinase IRK | 29 | 307 | - | - | |
Rops8g02100 | 970 | SMART | LRR_typ_2 | 532 | 556 | IPR003591 | - | |
Rops8g02100 | 970 | SMART | LRR_typ_2 | 337 | 360 | IPR003591 | - | |
Rops8g02100 | 970 | SMART | LRR_typ_2 | 192 | 215 | IPR003591 | - | |
Rops8g02100 | 970 | SMART | LRR_typ_2 | 508 | 531 | IPR003591 | - | |
Rops8g02100 | 970 | SMART | LRR_typ_2 | 216 | 240 | IPR003591 | - | |
Rops8g02100 | 970 | SMART | LRR_typ_2 | 412 | 436 | IPR003591 | - | |
Rops8g02100 | 970 | SMART | LRR_typ_2 | 312 | 336 | IPR003591 | - | |
Rops8g02100 | 970 | SMART | LRR_typ_2 | 119 | 143 | IPR003591 | - | |
Rops8g02100 | 970 | SMART | LRR_typ_2 | 288 | 311 | IPR003591 | - | |
Rops8g02100 | 970 | SMART | LRR_typ_2 | 484 | 507 | IPR003591 | - | |
Rops8g02100 | 970 | Pfam | Leucine rich repeat | 486 | 545 | IPR001611 | GO:0005515 | |
Rops8g02100 | 970 | Pfam | Leucine rich repeat | 268 | 325 | IPR001611 | GO:0005515 | |
Rops8g02100 | 970 | Pfam | Leucine rich repeat | 390 | 449 | IPR001611 | GO:0005515 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Rops8g02100 | Rops-Chr8 | 49065835 | 49069894 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Rops8g02100 | 1 | 967 | Receptor kinase-like Gene Family | AT5G01890 | 61.910 | 0.0 | 1156 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRR-VII-1 | Rops8g02100 | Pkinase | 1.9e-40 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Rops8g02100 | - | - | gmx:100790365 | 1689.86 |