Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02096 ATGGGGTGTTTCACTGTATTGAAGAGTAAGAAGAAAAAGTCTGATCAGATTGTGTATGTAAAGCGCGTAAGCCATAATGAGCATGTACCTACAGTACTGCCTGAACCTCAAACTCGCTCACTCCAGTCTGCACCTCCTAGTTTTAGGACCAGAGTGAAACCCATTCTGCCCATTAATAAAGTCACTAACAATAGAACAAGAGCACTGTCTGCCCCATCAACTCTTGATGCAGCAGAACAAGATGCTTTGGCCTCAATTGAGTATGAGGAACAAGAGGAGTCAAAACACCGAGCTGGATCAATGAAGGAGCAGCGTTCGTCTAGTCCACAACCTTTACCACTTCCATCTCCTCAGGGTGGTGGTTCATTGAAGGCTGTTGGCAGCTTTAAGTTGGGGACAGCTAGTGGTCCTCTAAATGCTTCTGGACCATTGCCACTTCCACCTACTGGGTCACTTCGGAACTTGCCATATGAGGAAATTGCTGCTGCTTGCCGCCATTTCTCTTCAGATCGATGCATGTCAGAATGTCTCTCGTCCACCATATATAAAGCTTCCTTTGGTGATGATGCTTCAAGTTCAAAGAAGTTTGAAGCCACTGTCACACGCCTTCACCCATCATCTCAGGGCTTGAAGGAATTCATAAATGAGGTCAATACTCTCGCATCTTTGCAGCATCCAAACCTCTGTAAATTGCTAGGATTTCATGCACGTGATGGTTCAGAACATAGAATGTTGGTTTATGAGAGGCTATACCATGGAAGCTTGGACCGCTTATTGTATGGGAGATCTGATGGGCCATCAATTGATTGGAATACAAGAATGAAAATTGCAATATGTGCTGCACAAGGTCTTACTTTCTTGCATGAAGAAGGGCCTTTTCAGGCGATGTATAATGAATTTTCAACAGCCAACATCCAGATTGACAAAGATTTCAGTGCAAAGCTTTCGGGGTATGGTTGTGTTGGACATATTCCTGAGGAAGAGATTTCAAGCAGTTCATCTGCTGTTGGAAACCTATCAATGGAGACACTGGAGAAGGGAATGCTCACTCCAAAGAGCAATGTATGGAGTTTTGGAATTTTTCTTCTGGAACTACTTACAGGAAGAAAGAATCTTGATAGCCGTCACCCCAAGGAAGAGAGGAATTTAGTCAAGTGGAGCAAGCCTTTCCTAGCTGATAATTACCGTCTATCATTGATCATGGATCCTCAACTCAAGGGTCGCTTTCCTTCAAAGGCAGCAAGAACAATAGCTGACATTGCACAGAGATGCCTCCAAAAGGAACCATCAGATAGACCAACCATGAGAACTGTTGTTGAGAATCTCAAAATGATACAGGATTTGAAGTACTCTATCAGGTTCCCATTGCAAGACCCAGCATCAATCTCTGGAAAACAAATGTCAAGATCACCAAGTCTTAATGGTATCATATGCCCTCCACCTAGGTCGAGTTTCTCTCCTTCACCACCATCAGGTGCCCCAGTTTCTGTTTCACCTCCAAGATTGTCTGGAGTGCCTATTCTCCTTCCACCTCGTGCTTGTTCTTCAACTATCTCCTTAGAGGAGCTTGATAGGCAAGAAAGCCGCAAGTCATCATCATCAGCCTCTAGGAGGGCTAGTGTTGAAGGATTTTGA 1635 0.4422 MGCFTVLKSKKKKSDQIVYVKRVSHNEHVPTVLPEPQTRSLQSAPPSFRTRVKPILPINKVTNNRTRALSAPSTLDAAEQDALASIEYEEQEESKHRAGSMKEQRSSSPQPLPLPSPQGGGSLKAVGSFKLGTASGPLNASGPLPLPPTGSLRNLPYEEIAAACRHFSSDRCMSECLSSTIYKASFGDDASSSKKFEATVTRLHPSSQGLKEFINEVNTLASLQHPNLCKLLGFHARDGSEHRMLVYERLYHGSLDRLLYGRSDGPSIDWNTRMKIAICAAQGLTFLHEEGPFQAMYNEFSTANIQIDKDFSAKLSGYGCVGHIPEEEISSSSSAVGNLSMETLEKGMLTPKSNVWSFGIFLLELLTGRKNLDSRHPKEERNLVKWSKPFLADNYRLSLIMDPQLKGRFPSKAARTIADIAQRCLQKEPSDRPTMRTVVENLKMIQDLKYSIRFPLQDPASISGKQMSRSPSLNGIICPPPRSSFSPSPPSGAPVSVSPPRLSGVPILLPPRACSSTISLEELDRQESRKSSSSASRRASVEGF* 545
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02096 544 MobiDBLite consensus disorder prediction 482 496 - -
Rops8g02096 544 MobiDBLite consensus disorder prediction 88 128 - -
Rops8g02096 544 ProSiteProfiles Protein kinase domain profile. 167 445 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02096 544 MobiDBLite consensus disorder prediction 461 481 - -
Rops8g02096 544 Gene3D Phosphorylase Kinase; domain 1 148 248 - -
Rops8g02096 544 Gene3D Transferase(Phosphotransferase) domain 1 250 454 - -
Rops8g02096 544 PANTHER OS01G0588500 PROTEIN-RELATED 101 446 - -
Rops8g02096 544 MobiDBLite consensus disorder prediction 461 544 - -
Rops8g02096 544 SUPERFAMILY Protein kinase-like (PK-like) 145 452 IPR011009 -
Rops8g02096 544 Pfam Protein tyrosine and serine/threonine kinase 180 442 IPR001245 GO:0004672|GO:0006468
Rops8g02096 544 MobiDBLite consensus disorder prediction 88 102 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02096 Rops-Chr8 49024028 49028859 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02096 146 446 Receptor kinase-like Gene Family AT4G02010 38.111 1.88e-56 199
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-II Rops8g02096 PK_Tyr_Ser-Thr 3.3e-26 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02096 - - gmx:100809117 932.939