Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02091 ATGATCCAAAGCTTGGACTCAGCAATTGCAGCAACTCCACAAGGAAATAAAATTGATCTTCATGCTTTACTTGACTTCAAAAGTAGTATAGTTGAAGATCCATTCCACATTATGAGTTTTTGGAATGACTCCATCAATCACTGCAACTGGATAGGAATCACTTGCAACTTCTCCAATAGAAGGGTCATGCACATTAGCCTTGAACAATTGAGATTGGGAGGTGCTAACAATCTTAAGGGAACAATCCCAACTTGGATAGGAAATCTTTCTTCTTTGTCTAGAATTAGCTTTGGATTGAACAACTTGCATGGAAGCATACCAAATGAGGTAGGTAGCTTATCAAGTTTGACATATCTTGTTCTATATGGGAATTATTTGTCTAGCACAGTTCCTTCTTCAATCTATAATATTTCTTCCTTGTACTATTTTACTCTTACTCAAAACAATCTCCATGGAAACTTACTCGCTAATGTTGGATTTACTCTTCCTAACCTTGAAGTATTTGCTGGTGGGGTCAATAATTTCACAGGGAATGTTCCTGCATCATTGTTAAATGCATCAAAACTAGAAGTTCTTGATTTTTCTCTTAATGATCTCACTGGAACACTGCCTAAGAACATAGGGGTCTTGCACAGCCAATTGCACACATTTGCTATTAATCCAAATGTAATACAAGGAAATATACCTGTTGGGATTGGCAATCTTGCTAACCTGGCCCTTCTAAGAATGGAAGGAAACCTCATAACTGGTAGTGTTCCTGAAGCATTAGCAAAACTCTTTCTGGAGGAGAACAACTTTGAAGGAAGCATACCTTCTAGTCTTGGAAAATGCCAAAGGTTATTGGTACTTATCCTTTATAGTAACAAGCTTAGTCGCACCATTCCAAAAGAAGTCATTAGCCTTTCTTCACTAGCAATATACTTGGATGTGTCTCAAAATGCTTTGTCAGGGACTCTGCCATCTGAAGTGGGAAACTCTTTCCATGGGGACATTCCTGAAACTTTGAGTAATTTGAGAGGTTTACAAGATATAGATCTTTCACACAATAATCTGTCTGGTAAGATTCTTGAATTTCTTGGTGAGTTCACACAGCTCAAGCATCTCAATGTTTCTTACAAAAACTTTGAAGGTGAAATACCAAAGAATGGAATATTCAAGAATGCAACTTCCATTTCATTATATGGAAACAACAAGCTCTGTGGTGGTGTCCTAGAATTGAATTTTCCTTCATGCACTATTAGGAAGAAAGCTTCTCTATTGAGAAAACTTCTTGCCCCCAAGAGCAAGAGAGAGACTTCCAGATCAACTACTGCCAATGATTTGGAGTTGGAAATTTCTTACTTAGAAATTGCACAGTGCACTGGTGGGTTTGTCCAGGATAACTTGATTGGTTCAGGAAGTTTTGGTTTTGTATATAAAGGAACTCTTTCAGGTAACGATTTCAAAGCTCTAGTCTTTGAGTTCATGTCTAATGGCAGTCTAGAAGATTGGTTGCATCCTTTAAATAATCTGCAATATCACACCAAGATATTGACATTTATTCAAAGACTGAACATAGCAATTGATGTTGCTTATGCGTTGGAATATCTCCACCACTTCTGTGAAACTCCAATTGTTCATTGTGATATAAAGCCAAGTAATGTTCTTCTTGACAATGATATGGTCGCCCATATTGGTGACTTTGGATTAGCTACATTTATGCTTAAAGACTCATGCAATTTTTCCAGGCAATCAATATGTCAGTTAGCCTAA 1752 0.3727 MIQSLDSAIAATPQGNKIDLHALLDFKSSIVEDPFHIMSFWNDSINHCNWIGITCNFSNRRVMHISLEQLRLGGANNLKGTIPTWIGNLSSLSRISFGLNNLHGSIPNEVGSLSSLTYLVLYGNYLSSTVPSSIYNISSLYYFTLTQNNLHGNLLANVGFTLPNLEVFAGGVNNFTGNVPASLLNASKLEVLDFSLNDLTGTLPKNIGVLHSQLHTFAINPNVIQGNIPVGIGNLANLALLRMEGNLITGSVPEALAKLFLEENNFEGSIPSSLGKCQRLLVLILYSNKLSRTIPKEVISLSSLAIYLDVSQNALSGTLPSEVGNSFHGDIPETLSNLRGLQDIDLSHNNLSGKILEFLGEFTQLKHLNVSYKNFEGEIPKNGIFKNATSISLYGNNKLCGGVLELNFPSCTIRKKASLLRKLLAPKSKRETSRSTTANDLELEISYLEIAQCTGGFVQDNLIGSGSFGFVYKGTLSGNDFKALVFEFMSNGSLEDWLHPLNNLQYHTKILTFIQRLNIAIDVAYALEYLHHFCETPIVHCDIKPSNVLLDNDMVAHIGDFGLATFMLKDSCNFSRQSICQLA* 584
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02091 583 PANTHER OS04G0122200 PROTEIN 201 475 - -
Rops8g02091 583 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 61 154 - -
Rops8g02091 583 Pfam Protein kinase domain 482 571 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02091 583 ProSitePatterns Serine/Threonine protein kinases active-site signature. 538 550 IPR008271 GO:0004672|GO:0006468
Rops8g02091 583 Pfam Leucine rich repeat N-terminal domain 19 56 IPR013210 -
Rops8g02091 583 ProSiteProfiles Protein kinase domain profile. 317 583 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02091 583 SUPERFAMILY L domain-like 31 407 - -
Rops8g02091 583 SUPERFAMILY Protein kinase-like (PK-like) 431 573 IPR011009 -
Rops8g02091 583 Gene3D Ribonuclease Inhibitor 17 164 IPR032675 -
Rops8g02091 583 Gene3D Transferase(Phosphotransferase) domain 1 449 580 - -
Rops8g02091 583 Gene3D Ribonuclease Inhibitor 165 418 IPR032675 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02091 Rops-Chr8 48856437 48858943 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02091 16 577 Receptor kinase-like Gene Family AT3G47570 30.994 1.46e-113 360
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XII-1 Rops8g02091 Pkinase 2.1e-15 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02091 - - vum:124827064 492.271