Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02085 ATGTACAAGGGGAGATTCTGCACTGGTGGTGGATTTAAGGCTCCTCTTGGATATGTTGAAACTGACCCATCTGGTCGTTATGGCCGTTTCAGGGATGTTCTGGGCAAAGGAGCAATGAAGACTGTGTATAGGGCATTTGATGAACTCCAGGGGATTGAAGTTGCTTGGAACCAAGTCAAGCTCGGTAATGTCTTTCATTCCCCAGAGCACCTTCAGCGTCTTTATTCAGAGGTTCATCTCCTTAAGCACCTCGAGCATGAATCTATGATGATCTTCTATGGTTCTTGGATCGATGTGGATCGCAGAACCTTCAACTTCATCACCGAATTGTTCACCTCAGGCACCCTTAGAGAGTATAGGCAAAAGTATAGGCGTGTAGATATCCGAGCAGTGAAGAATTGGGCTCGCCAGATTCTCGGTGGTTTGGACTATTTACACAGCTATAATCCTCCTGTGATACATAGAGACCTCAAGTGTGACAATATCTTTGTCAATGGCCACATGGGGCAGGTCAAGATTGGTGACTTGGGCCTGGCAGCTATACTTCGTAGCTCTCAACATGCCCACAGTGTCATAGGTACACCAGAGTTCATGGCACCAGAATTGTATGAAGAAAAATACAATGAGCTTGTAGACATATACTCATTTGGGATGTGTATGATTGAGATGCTTACCCTTGAGTTCCCATACAGTGAATGCTCCAACGCAGCTCAAATATACAAGAAAGTTACCTCGGGGAAGCTACCAGAAGCATTTTACAGGATCCAAGATTTGGAAGCTCAGAGGTTTGTGGGAAGATGTTTAGCAAATGTCTCAAAGAGACCATCAGCAAAGGAGCTCTTGTTGGACCCATTTTTAGCCACTGACCAAAAACTTGAATTGCCATTGCAAAACTCAACATTGTCTACAAATCAAACTATTAAGCTTAATTCCACTGCAGCAGTTGCCAATGAGCATCTTTCAATAGGTGATCAGACAAAGAGCACAGACATGACAATCACTGGATCAATAAATGAAGAGAATAACACAATTTTCCTTAAAGTGCGGATATCTGACGAAATGGGGCAAACAAGGCATATATTCTTTCCATTTGACACAATAAAAGACACTGCTATTGAGGTAGCTATGGAGATGGTGCAAGAACTTGAAATTAGCCACTTGGAACCATTAGAGATTGCTGCAATGATAGATCATGAGATATCAGCTTTAGTTCCCACTTGGAGGGGTAGGAGTAAATGTCACTGTCAGCATCAACGACAGCACAGCTTTAACTATGAAGAAGATGAGGATATCAATAATCATCATCCTTTCTTCTTATCATCTTCTCCATCTTCCCCTCATGGTTCTCCCCCCAAGTTTGGTTCCTCCTCCAAGATACACTTCCGTGGGAACCATTGCACATTTACTCAAGACTGGCCTCAAGATGATCCATTCATGAACGACGATGCAAGCTCTCTGAGCTCCATGAACTCCTACAAGTGTTCCAATTTCCAATACTGTGACTCAAGGAATGAAGATGAGCATGTTCCACCAGTACTACCAGATGGAGCTGAACCCATCAAGAAGATCACAAGACCATTCCGTAGGGAAGAGTTAGAAGCTAATTTCACCAAACAGTTTTGCCACCTCACAATGGACTCTTCTTGCAACTGCAGATATGGTGGGTCAAGGCACAGAAGGCCCAGGCTAACCAGGATTCATTCGAGTGGAGACGAGAGGAGAAAGTTCAACACGGTTGGAGCCATCGAGGGAATTGGGTTTCAGCATCCATATAGAAGTGGATGCTTTCCTCGTAGAAGCTTCATATAG 1809 0.4378 MYKGRFCTGGGFKAPLGYVETDPSGRYGRFRDVLGKGAMKTVYRAFDELQGIEVAWNQVKLGNVFHSPEHLQRLYSEVHLLKHLEHESMMIFYGSWIDVDRRTFNFITELFTSGTLREYRQKYRRVDIRAVKNWARQILGGLDYLHSYNPPVIHRDLKCDNIFVNGHMGQVKIGDLGLAAILRSSQHAHSVIGTPEFMAPELYEEKYNELVDIYSFGMCMIEMLTLEFPYSECSNAAQIYKKVTSGKLPEAFYRIQDLEAQRFVGRCLANVSKRPSAKELLLDPFLATDQKLELPLQNSTLSTNQTIKLNSTAAVANEHLSIGDQTKSTDMTITGSINEENNTIFLKVRISDEMGQTRHIFFPFDTIKDTAIEVAMEMVQELEISHLEPLEIAAMIDHEISALVPTWRGRSKCHCQHQRQHSFNYEEDEDINNHHPFFLSSSPSSPHGSPPKFGSSSKIHFRGNHCTFTQDWPQDDPFMNDDASSLSSMNSYKCSNFQYCDSRNEDEHVPPVLPDGAEPIKKITRPFRREELEANFTKQFCHLTMDSSCNCRYGGSRHRRPRLTRIHSSGDERRKFNTVGAIEGIGFQHPYRSGCFPRRSFI* 603
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02085 602 ProSiteProfiles Protein kinase domain profile. 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02085 602 FunFam Probable serine/threonine-protein kinase WNK1 13 109 - -
Rops8g02085 602 CDD STKc_WNK 26 286 - -
Rops8g02085 602 Gene3D Transferase(Phosphotransferase) domain 1 111 294 - -
Rops8g02085 602 FunFam probable serine/threonine-protein kinase WNK9 111 291 - -
Rops8g02085 602 SUPERFAMILY Protein kinase-like (PK-like) 30 287 IPR011009 -
Rops8g02085 602 ProSitePatterns Serine/Threonine protein kinases active-site signature. 152 164 IPR008271 GO:0004672|GO:0006468
Rops8g02085 602 MobiDBLite consensus disorder prediction 434 457 - -
Rops8g02085 602 Pfam Protein kinase domain 32 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02085 602 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 18 486 - -
Rops8g02085 602 Gene3D Phosphorylase Kinase; domain 1 14 109 - -
Rops8g02085 602 MobiDBLite consensus disorder prediction 435 452 - -
Rops8g02085 602 SMART serkin_6 28 286 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02085 Rops-Chr8 48684159 48688823 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02085 16 430 MAP Kinase Kinase Kinase AT3G51630 68.496 0.0 577
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Rops8g02085 Pkinase 1.7e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02085 K08867 - gmx:100272206 887.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Rops8g02085 8 48684159 48688823 Rops8g02085 8 48684159 48688823 ECH
Rops8g02085 8 48684159 48688823 Rops4g01146 4 30927592 30932959 PCT