Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02083 ATGGGCAATTACAGGTTCAAATTATCAGATATGATTCCCAATGCCTGGTTTTACAAGCTTAGGGACATGGGAGGAGCAAGAAAACAAACCCAAACCCAACCCAAGAAGAAAAAACAATCTTCACCAGCCTCAGCTACACAGTCATCAAAACCAAAGCAACCCCACCAATGCAATCCCAGAAAGTCTTACTACTTTACAAGAGAGCTTAACCCAAACAATAGAATCTACACTTCACCAGCAAACAACCAAAATGTCTCAAACACCAATTTCCCTGAATCACCAAGAAAATCCTCCAAACAACGAACCAAGAGAAAAACTACAAGGACTTCTACTTCACCTAAACCTGTCACCCCTTCTGTCTCTGCTAATTGTAACTGCCACAACAACACCCTTGAATCCGATTTCCCACCAGAGAACTCTTCATCCCCACTTGATAGCTCTGCAGAATCAGAGTTCCCTGACCCAGAAATCAGAACAGACCGTGTTCTTCCCACAGAATCATTTGATGAAATGGTTCCAGGTTCCAACACTTGTGGCTGCAAGATACACTGCAACAACACCAATGATATCATCATAGATGTGGACAACAATTCCATAGCAAGAAAAGATGATAAGCTAGATGGGTATGATTCCTTTTCTGAGCTCATGCTTCCACCAATAGTGACCAAGCCAACAAAGTTCAATGACTTGTTGAATGATGCCAAGAAGAAAGAAACCAAACCCAGAAGCAGAATGGCTACACATGAAGAAGGGTCTCTGAAAGTTAAAATTTTTAAGGAAGAACAACAGAAGAACACTTCTGGAAGGAGATTCTCTGTGACTTCTCCTGGTGTGAGGCTTAGGATTAATTCACCAAGAATTGCAGGCCGGAAGGTCCAGTCACATGGCCGGAAAAGTGTGTCATCCACAACTGGCTACCGGAGAAGCCTCTCAGATAGCTTTGCAATTGTGAAGTCATCGTTCAATCCACAAAAGGATTTCAGAGAATCAATGGTGGAGATGATTGTGCAGCACAACATAAGGACATCAAAGGATTTGGAAGATCTTCTTGCTTGCTACCTTTCTCTTAATTCAGATGTGTATCATGATCTCATCATCAAAGTGTTCAAGCAAATATGGTTTGATTTAACTGATAATCCCTAG 1143 0.4173 MGNYRFKLSDMIPNAWFYKLRDMGGARKQTQTQPKKKKQSSPASATQSSKPKQPHQCNPRKSYYFTRELNPNNRIYTSPANNQNVSNTNFPESPRKSSKQRTKRKTTRTSTSPKPVTPSVSANCNCHNNTLESDFPPENSSSPLDSSAESEFPDPEIRTDRVLPTESFDEMVPGSNTCGCKIHCNNTNDIIIDVDNNSIARKDDKLDGYDSFSELMLPPIVTKPTKFNDLLNDAKKKETKPRSRMATHEEGSLKVKIFKEEQQKNTSGRRFSVTSPGVRLRINSPRIAGRKVQSHGRKSVSSTTGYRRSLSDSFAIVKSSFNPQKDFRESMVEMIVQHNIRTSKDLEDLLACYLSLNSDVYHDLIIKVFKQIWFDLTDNP* 381
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02083 380 NCBIfam uncharacterized plant-specific domain TIGR01568 315 377 IPR006458 -
Rops8g02083 380 MobiDBLite consensus disorder prediction 72 95 - -
Rops8g02083 380 MobiDBLite consensus disorder prediction 26 59 - -
Rops8g02083 380 Pfam DNA-binding domain 1 41 IPR025830 GO:0003677
Rops8g02083 380 MobiDBLite consensus disorder prediction 109 148 - -
Rops8g02083 380 Pfam Transcriptional repressor, ovate 320 376 IPR006458 -
Rops8g02083 380 ProSiteProfiles OVATE domain profile. 316 375 IPR006458 -
Rops8g02083 380 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 48 377 IPR038933 GO:0045892
Rops8g02083 380 MobiDBLite consensus disorder prediction 72 156 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02083 Rops-Chr8 48625126 48626573 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Rops8g02083 Ovate 8.4e-23 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02083 - - aprc:113863721 467.618