Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02081 ATGGCCGTCCGACAAGTTGCCGCCATTCATTTCAAGAACTTCATTGCTAAGAATTGGTCTCCTCATCACTCCCCTACTGCTCCTGAACTGAGGGTGAAATTGGATGGGAAGAGTACCGATCAAAAGCCAAATACACTAAGATCAAAACATTCTGCACCAGAGCAGCAGAGAAGAAGCAAAATTAACGATCGGCAAGTCTTACCTACCATGCTGATAGGAGTTTTTCTGGATGCTAGAAGAGGCACTTGCAAATTGTAG 258 0.4457 MAVRQVAAIHFKNFIAKNWSPHHSPTAPELRVKLDGKSTDQKPNTLRSKHSAPEQQRRSKINDRQVLPTMLIGVFLDARRGTCKL* 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02081 85 MobiDBLite consensus disorder prediction 18 62 - -
Rops8g02081 85 ProSiteProfiles Importin-beta N-terminal domain profile. 1 37 IPR001494 GO:0006886|GO:0031267
Rops8g02081 85 MobiDBLite consensus disorder prediction 28 44 - -
Rops8g02081 85 PANTHER BES1-INTERACTING MYC-LIKE PROTEIN 24 67 IPR044295 GO:0003700|GO:0006351|GO:0046983
Rops8g02081 85 Pfam Importin-beta N-terminal domain 2 24 IPR001494 GO:0006886|GO:0031267
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02081 Rops-Chr8 48595733 48596702 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02081 29 72 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G08130 63.043 1.09e-08 48.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02081 - - adu:107468970 68.5514