Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Rops8g02076 ATGGAACCAAAGGGAAGTGTGCTTATGCAAAGATATGAACTAGGGAGATTGTTAGGCCAAGGAACCTTTGCTAAGGTCTACCATGCTAGGAACCTTATAACTGGCGTGAGTGTGGCCATTAAGGTAATAGATAAAGAAAAGATTTTGAAAATCGGGATGATTGATCAGATTAAGCGTGAAATTTCTGTGATGAGATTAGTCAGACACCCACATGTGGTTGAGCTGTATGAGGTGATGGCCAGTAAAACCAAAATTTACTTTGTCATGGAGTATGCCAAAGGTGGTGAGCTCTTCAACAAGATAGCCAAAGGAAAGCTCAAGGTGGATGTTGTTAGGAGGTATTTTCAGCAACTGATTGGTGCAGTTGACTACTGCCATAGCAGGGGTGTGTATCATCGAGATTTAAAACCCGAAAATCTACTATTGGATGAAAATGAGAATCTGAAGGTTTCAGACTTTGGGTTGAGTACCCTTGCTGAATCTAAGTGTCAAGATGGATTACTCCATACTACATGTGGTACCCCTGCCTATGTTGCTCCTGAAGTGATAAACAGAAAGGGTTATGATGGGAGCAAAGCTGATATATGGTCATGTGGGGTAATCTTGTTTGTTCTATTGGCTGGTTATCTTCCATTCCATGATTCAAATCTGATGGAGATGTACAGGAAAATTGGTAAAGGGGAATTCAAGTTTCCTAAATGGTTTGCAGCAGATGTTCGCCGGTTATTGTCCAAAATGTTGGACCCAAACCCAAAGACCAGGATATCAATGGCCAAGATTATGGAAAATTCTTGGTTTAGAAAGGGGTTAGAGACGCCAGTTACTATTGAGACCAAAAACAAAGAAGAACTAGCTCCTCTGGATGCTGATGGAGTATTTGAAGTGTGTGAGAATGGTAGTGGTCCTGTTGCAGAGTCAAAACAAGAGCAAGCAAAGCCTTGTAATTTAAATGCTTTTGATATCATCTCCTTCTCAACTGGTTTTGATTTATCTGGTTTGTTTGAGGACACAGATCATAAGAAAGAGATGCGGTTTACATCTAACAAGCCTGCCTCAATTATAATCTCCAAGTTGCAAGAAATTTGCAAGTGTCTTCACTTGAAAGTAAAAAAGAAAGATGGAGGCTTGTTCAAGTTGGAAGGTTCTAAGGAAGGCAGGAAAGGGACTCTGGGTATTGATGCTGAGATTTTTGAGATTACCCCGCTCGTTCATCTGGTGGAATTTAAGAAATCCAATGGGGATACAGTGGAGTACCAGAAGCTTCTGAAACAGGACATTAGGCCAGCACTTAAGGACATTGTTTGGGCCTGGCAAGGTGAACAACCACAGCAACTCCAACATGAAGTAGTGCAGTAA 1356 0.4122 MEPKGSVLMQRYELGRLLGQGTFAKVYHARNLITGVSVAIKVIDKEKILKIGMIDQIKREISVMRLVRHPHVVELYEVMASKTKIYFVMEYAKGGELFNKIAKGKLKVDVVRRYFQQLIGAVDYCHSRGVYHRDLKPENLLLDENENLKVSDFGLSTLAESKCQDGLLHTTCGTPAYVAPEVINRKGYDGSKADIWSCGVILFVLLAGYLPFHDSNLMEMYRKIGKGEFKFPKWFAADVRRLLSKMLDPNPKTRISMAKIMENSWFRKGLETPVTIETKNKEELAPLDADGVFEVCENGSGPVAESKQEQAKPCNLNAFDIISFSTGFDLSGLFEDTDHKKEMRFTSNKPASIIISKLQEICKCLHLKVKKKDGGLFKLEGSKEGRKGTLGIDAEIFEITPLVHLVEFKKSNGDTVEYQKLLKQDIRPALKDIVWAWQGEQPQQLQHEVVQ* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Rops8g02076 451 Pfam NAF domain 313 371 IPR004041 GO:0007165
Rops8g02076 451 Gene3D Transferase(Phosphotransferase) domain 1 92 272 - -
Rops8g02076 451 Pfam Protein kinase domain 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02076 451 ProSiteProfiles NAF domain profile. 311 335 IPR018451 GO:0007165
Rops8g02076 451 SMART serkin_6 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02076 451 SUPERFAMILY Protein kinase-like (PK-like) 8 274 IPR011009 -
Rops8g02076 451 CDD STKc_SnRK3 11 265 - -
Rops8g02076 451 ProSiteProfiles Protein kinase domain profile. 12 266 IPR000719 GO:0004672|GO:0005524|GO:0006468
Rops8g02076 451 Gene3D Kinase associated domain 1, KA1 310 436 - -
Rops8g02076 451 FunFam Non-specific serine/threonine protein kinase 311 435 - -
Rops8g02076 451 FunFam Non-specific serine/threonine protein kinase 2 291 - -
Rops8g02076 451 ProSitePatterns Serine/Threonine protein kinases active-site signature. 130 142 IPR008271 GO:0004672|GO:0006468
Rops8g02076 451 PANTHER CALCIUM/CALMODULIN-DEPENDENT PROTEIN KINASE KINASE-RELATED 7 431 - -
Rops8g02076 451 FunFam Non-specific serine/threonine protein kinase 3 91 - -
Rops8g02076 451 Gene3D Phosphorylase Kinase; domain 1 3 91 - -
Rops8g02076 451 CDD CIPK_C 317 431 - -
Rops8g02076 451 ProSitePatterns Protein kinases ATP-binding region signature. 18 41 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Rops8g02076 Rops-Chr8 48478853 48482838 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Rops8g02076 1 443 CBL-interacting serine-threonine protein kinases AT5G58380 67.692 0.0 639
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_CAMKL-CHK1 Rops8g02076 Pkinase 5.1e-74 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Rops8g02076 K07198 - gmx:100811923 766.533